RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 Q6ZS46 218 aa13.08□□□□□ -0.32
USP48-210ENST00000489108 OR5D13Q8NGL4 314 aa13.08□□□□□ -0.32
USP48-210ENST00000489108 MED30Q96HR3 178 aa13.08□□□□□ -0.32
USP48-210ENST00000489108 RSRC1Q96IZ7 334 aaKnown RBP13.08□□□□□ -0.32
USP48-210ENST00000489108 CDCA4Q9BXL8 241 aa13.08□□□□□ -0.32
USP48-210ENST00000489108 NSRP1Q9H0G5 558 aaKnown RBP13.08□□□□□ -0.32
USP48-210ENST00000489108 ELL3Q9HB65 397 aaPredicted RBP13.08□□□□□ -0.32
USP48-210ENST00000489108 RPRD1BQ9NQG5 326 aaKnown RBP13.08□□□□□ -0.32
USP48-210ENST00000489108 MRPL22Q9NWU5 206 aaKnown RBP13.08□□□□□ -0.32
USP48-210ENST00000489108 NKX6-3A6NJ46 265 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 RENP00797 406 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 SLC2A1P11166 492 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 HOXD3P31249 432 aaPredicted RBP13.07□□□□□ -0.32
USP48-210ENST00000489108 OTX1P32242 354 aaPredicted RBP13.07□□□□□ -0.32
USP48-210ENST00000489108 DDOSTP39656 456 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 RPS27P42677 84 aaKnown RBP13.07□□□□□ -0.32
USP48-210ENST00000489108 OMPP47874 163 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 PRKXP51817 358 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 SLC35A2P78381 396 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 CD83Q01151 205 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 COL10A1Q03692 680 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 ZBTB46Q86UZ6 589 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 MKXQ8IYA7 352 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 OR4K13Q8NH42 304 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 RAB3IPQ96QF0 476 aaPredicted RBP13.07□□□□□ -0.32
USP48-210ENST00000489108 TMEM120AQ9BXJ8 343 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 PRSS22Q9GZN4 317 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 DNTTIP1Q9H147 329 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 FN3KQ9H479 309 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 TMBIM4Q9HC24 238 aa13.07□□□□□ -0.32
USP48-210ENST00000489108 TRBV23-1A0A0A0MS06 115 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 UNC119BA6NIH7 251 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 FAM220BPB1ANY3 271 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 PF4V1P10720 104 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 HIST1H1CP16403 213 aaKnown RBP13.06□□□□□ -0.32
USP48-210ENST00000489108 CAV3P56539 151 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 CNN3Q15417 329 aaKnown RBP13.06□□□□□ -0.32
USP48-210ENST00000489108 PLA1AQ53H76 456 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 SMARCD3Q6STE5 483 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 TMEM219Q86XT9 240 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 OR2T12Q8NG77 320 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 ANGPTL6Q8NI99 470 aa13.06□□□□□ -0.32
USP48-210ENST00000489108 RCC1LQ96I51 464 aaKnown RBP13.06□□□□□ -0.32
USP48-210ENST00000489108 OR6C68A6NDL8 312 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 SIGLEC5O15389 551 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 TIPRLO75663 272 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 ZNF682O95780 498 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 PF4P02776 101 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 ACAA1P09110 424 aaPredicted RBP13.05□□□□□ -0.32
USP48-210ENST00000489108 ZNF823P16415 610 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 BLCAPP62952 87 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 MXRA7P84157 204 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 FAM3AP98173 230 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 EGFEM1PQ0D2K5 195 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 TMEM95Q3KNT9 176 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 IFI44LQ53G44 452 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 SLC16A9Q7RTY1 509 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 FAM185AQ8N0U4 392 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 DYNAPQ8N1N2 210 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 OR5AU1Q8NGC0 362 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 SPSB4Q96A44 273 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 TLNRD1Q9H1K6 362 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 ANKRD19PQ9H560 264 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 OPA3Q9H6K4 179 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 GMPR2Q9P2T1 348 aaKnown RBP13.05□□□□□ -0.32
USP48-210ENST00000489108 RAB21Q9UL25 225 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 TCF19Q9Y242 345 aa13.05□□□□□ -0.32
USP48-210ENST00000489108 A6NDX4 124 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 E9PQ18 207 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 AKR7A2O43488 359 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 XRCC2O43543 280 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 NPPAP01160 153 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 PSKH1P11801 424 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 LGALS4P56470 323 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 ERVFRD-1P60508 538 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 ARSJQ5FYB0 599 aaPredicted RBP13.04□□□□□ -0.32
USP48-210ENST00000489108 FKBP9P1Q75LS8 142 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 LHFPL4Q7Z7J7 247 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 ZNRF1Q8ND25 227 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 OR10Z1Q8NGY1 313 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 STON2Q8WXE9 905 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 RPL3LQ92901 407 aaKnown RBP13.04□□□□□ -0.32
USP48-210ENST00000489108 SGK3Q96BR1 496 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 COPS4Q9BT78 406 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 MUC13Q9H3R2 512 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 INPP5EQ9NRR6 644 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 KCNG2Q9UJ96 466 aa13.04□□□□□ -0.32
USP48-210ENST00000489108 EPPK1P58107 5090 aaKnown RBP13.04□□□□□ -0.32
USP48-210ENST00000489108 TVP23AA6NH52 213 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 VGLL3A8MV65 326 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 MRASO14807 208 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 ARPC3O15145 178 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 TBX1O43435 398 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 GLCEO94923 617 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 DUS4LO95620 317 aaKnown RBP13.03□□□□□ -0.32
USP48-210ENST00000489108 H1F0P07305 194 aaKnown RBP13.03□□□□□ -0.32
USP48-210ENST00000489108 COX7A1P24310 79 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 NOS3P29474 1203 aa13.03□□□□□ -0.32
USP48-210ENST00000489108 PYCR1P32322 319 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms