RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 POLE4Q9NR33 117 aa6.91□□□□□ -1.3
TRAPPC12-221ENST00000489032 CMC2Q9NRP2 79 aa6.91□□□□□ -1.3
TRAPPC12-221ENST00000489032 IMPAD1Q9NX62 359 aa6.91□□□□□ -1.3
TRAPPC12-221ENST00000489032 NPAP1Q9NZP6 1156 aa6.91□□□□□ -1.3
TRAPPC12-221ENST00000489032 CRNNQ9UBG3 495 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC12-221ENST00000489032 B9D1Q9UPM9 204 aa6.91□□□□□ -1.3
TRAPPC12-221ENST00000489032 UGT2A1Q9Y4X1 527 aa6.91□□□□□ -1.3
TRAPPC12-221ENST00000489032 TIMM10BQ9Y5J6 103 aa6.91□□□□□ -1.3
TRAPPC12-221ENST00000489032 IGKV1D-43A0A0B4J1Z2 117 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 IGHV1-18A0A0C4DH31 117 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 OR6C68A6NDL8 312 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 DPRXA6NFQ7 191 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 CCDC160A6NGH7 325 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 PRR23D1E9PI22 279 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 ZNF701M0R085 212 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 RHODO00212 210 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 NOL3O60936 208 aaKnown RBP6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 TMCC2O75069 709 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 IGKV3-15P01624 115 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 LCKP06239 509 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 PRR23D2P0DMB1 279 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 FMO3P31513 532 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 APLNRP35414 380 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 POLR2IP36954 125 aaKnown RBP6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 SLC25A1P53007 311 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 CDH15P55291 814 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 LSM6P62312 80 aaKnown RBP6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 CDK5Q00535 292 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 GALK2Q01415 458 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 SCRN3Q0VDG4 424 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 CRMP1Q14194 572 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 MAD2L1BPQ15013 274 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 PTGES3Q15185 160 aaKnown RBP6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 ETFDHQ16134 617 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 TBC1D28Q2M2D7 210 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 ADAM5Q6NVV9 412 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 UNQ6126/PRO20091Q6UXV3 157 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 FOXL2NBQ6ZUU3 175 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 KCTD8Q6ZWB6 473 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 CYB561A3Q8NBI2 242 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 NPEPL1Q8NDH3 523 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 C2CD4CQ8TF44 421 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 MYDGFQ969H8 173 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 NABP1Q96AH0 204 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 TSSK2Q96PF2 358 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 TSC22D3Q99576 134 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 UBTD1Q9HAC8 227 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 CDH20Q9HBT6 801 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 FAIMQ9NVQ4 179 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 B3GNT2Q9NY97 397 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 TVP23BQ9NYZ1 205 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 KCNG2Q9UJ96 466 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 COMMD3-BMI1R4GMX3 469 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 ALPK2Q86TB3 2170 aa6.9□□□□□ -1.3
TRAPPC12-221ENST00000489032 ZANQ9Y493 2812 aa6.9□□□□□ -1.31
TRAPPC12-221ENST00000489032 IGLV1-36A0A0B4J1U3 117 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 SH2D7A6NKC9 451 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 E9PQ18 207 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 SLC1A7O00341 560 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 SURF4O15260 269 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 IGLV1-44P01699 117 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 SERPINA5P05154 406 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 CECR9P0C854 216 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 PATE4P0C8F1 98 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF32P17041 273 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 CD53P19397 219 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 PYCR1P32322 319 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 GDI2P50395 445 aaKnown RBP6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 CDH11P55287 796 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 NAAAQ02083 359 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 AQP6Q13520 282 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF672Q499Z4 452 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 TMEM268Q5VZI3 342 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 TMEM236Q5W0B7 351 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 ACSM5Q6NUN0 579 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 ARL9Q6T311 187 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 OR6V1Q8N148 313 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 SLC30A7Q8NEW0 376 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 BPIFB6Q8NFQ5 453 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 OR4F15Q8NGB8 312 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 OR9Q1Q8NGQ5 310 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 OR6K6Q8NGW6 343 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 OR2AJ1Q8NGZ0 328 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 FAM81AQ8TBF8 368 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 TRUB1Q8WWH5 349 aaKnown RBP6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 C11orf40Q8WZ69 217 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 HTRA1Q92743 480 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 RNFT2Q96EX2 444 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 Q96MT0 163 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 FOXN4Q96NZ1 517 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 TMEM204Q9BSN7 226 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF416Q9BWM5 594 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 OR51V1Q9H2C8 321 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 FN3KQ9H479 309 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 PLCXD1Q9NUJ7 323 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 CLN6Q9NWW5 311 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 TMEM160Q9NX00 188 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 CISD1Q9NZ45 108 aaKnown RBP6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 EIF3KQ9UBQ5 218 aaKnown RBP6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 RSL24D1Q9UHA3 163 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms