RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 VAPBO95292 243 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 TTC4O95801 387 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 IGHV1-8P0DP01 117 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 CCL2P13500 99 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 CELP19835 753 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 PRKACBP22694 351 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 PCK1P35558 622 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 MYCNOSP40205 109 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 ERFP50548 548 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 PAFAH1B2P68402 229 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 USF2Q15853 346 aaPredicted RBP1.84□□□□□ -2.11
RFC4-213ENST00000489028 CEMP1Q6PRD7 247 aaPredicted RBP1.84□□□□□ -2.11
RFC4-213ENST00000489028 RTL4Q6ZR62 310 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 HMGN2P46Q86SG4 172 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 CALHM1Q8IU99 346 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 SLC30A8Q8IWU4 369 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 DAW1Q8N136 415 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 SYS1Q8N2H4 156 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 C15orf56Q8N910 161 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 C19orf18Q8NEA5 215 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 OR6K2Q8NGY2 324 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 RERGQ96A58 199 aaPredicted RBP1.84□□□□□ -2.11
RFC4-213ENST00000489028 RDH12Q96NR8 316 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 ZNF382Q96SR6 550 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 KCNS3Q9BQ31 491 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 CHID1Q9BWS9 393 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 HINT2Q9BX68 163 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 ULBP2Q9BZM5 246 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 RAB1BQ9H0U4 201 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 SYT4Q9H2B2 425 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 RRAGDQ9NQL2 400 aaPredicted RBP1.84□□□□□ -2.11
RFC4-213ENST00000489028 ZNF302Q9NR11 478 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 TREX1Q9NSU2 369 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 MARCOQ9UEW3 520 aaPredicted RBP1.84□□□□□ -2.11
RFC4-213ENST00000489028 CFL2Q9Y281 166 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 OR51B2Q9Y5P1 312 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 GPR179Q6PRD1 2367 aa1.84□□□□□ -2.12
RFC4-213ENST00000489028 CAMTA1Q9Y6Y1 1673 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 LINC00854A0A1B0GVQ3 168 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 ANKRD20A5PA0PJZ0 165 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 ALOX12BO75342 701 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 SMC2O95347 1197 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 NPPAP01160 153 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 MUC1P15941 1255 aaPredicted RBP1.83□□□□□ -2.12
RFC4-213ENST00000489028 SPAM1P38567 509 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 GPR4P46093 362 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 DNASE1L1P49184 302 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 HCCSP53701 268 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 ATP5J2P56134 94 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 RPL31P62899 125 aaKnown RBP1.83□□□□□ -2.12
RFC4-213ENST00000489028 CACNG7P62955 275 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 SLC35A1P78382 337 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 IFITM3Q01628 133 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 PPIDQ08752 370 aaKnown RBP1.83□□□□□ -2.12
RFC4-213ENST00000489028 GPR176Q14439 515 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 OR1Q1Q15612 314 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 C18orf21Q32NC0 220 aaPredicted RBP1.83□□□□□ -2.12
RFC4-213ENST00000489028 FAM78AQ5JUQ0 283 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 KPRPQ5T749 579 aaPredicted RBP1.83□□□□□ -2.12
RFC4-213ENST00000489028 SLC25A34Q6PIV7 304 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 SYCE1Q8N0S2 351 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 GPR26Q8NDV2 337 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 OR51A7Q8NH64 312 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 OR5W2Q8NH69 310 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 OR1S1Q8NH92 325 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 COQ8AQ8NI60 647 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 LGALS14Q8TCE9 139 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 C15orf40Q8WUR7 153 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 CACNG8Q8WXS5 425 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 TMEM234Q8WY98 164 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 CDKL2Q92772 493 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 PTX4Q96A99 478 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 TMIGD2Q96BF3 282 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 CCDC124Q96CT7 223 aaKnown RBP1.83□□□□□ -2.12
RFC4-213ENST00000489028 PDXPQ96GD0 296 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 ATP6V1G3Q96LB4 118 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 EMC6Q9BV81 110 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 OSBPL11Q9BXB4 747 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 VAPAQ9P0L0 249 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 ZNF229Q9UJW7 825 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 ZNF257Q9Y2Q1 563 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 RBMX2Q9Y388 322 aaKnown RBP1.83□□□□□ -2.12
RFC4-213ENST00000489028 DENND4AQ7Z401 1863 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 PCDH11XQ9BZA7 1347 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 PIK3R4Q99570 1358 aa1.83□□□□□ -2.12
RFC4-213ENST00000489028 NUP214P35658 2090 aaPredicted RBP1.82□□□□□ -2.12
RFC4-213ENST00000489028 IGLV2-18A0A075B6J9 118 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 SMIM26A0A096LP01 95 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 IGHV2OR16-5A0A0B4J2B6 119 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 IGHV1OR15-9A0A0B4J2B8 117 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 A0A1B0GVX0 72 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 ERICH2A1L162 156 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 TNFRSF11BO00300 401 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 MYL12BO14950 172 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 POLR3GO15318 223 aaPredicted RBP1.82□□□□□ -2.12
RFC4-213ENST00000489028 B4GALT5O43286 388 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 CHST10O43529 356 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 RBBP9O75884 186 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 YIF1AO95070 293 aa1.82□□□□□ -2.12
RFC4-213ENST00000489028 CISD3P0C7P0 127 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms