RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 DPAGT1Q9H3H5 408 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 ARMC1Q9NVT9 282 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 BAIAP2Q9UQB8 552 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 TET2Q6N021 2002 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-231ENST00000488905 CLPXO76031 633 aa15.16■□□□□ 0.02
HDAC6-231ENST00000488905 SOX14O95416 240 aa15.16■□□□□ 0.02
HDAC6-231ENST00000488905 ATP6V1B2P21281 511 aa15.16■□□□□ 0.02
HDAC6-231ENST00000488905 PROK1P58294 105 aa15.16■□□□□ 0.02
HDAC6-231ENST00000488905 ASPHD2Q6ICH7 369 aa15.16■□□□□ 0.02
HDAC6-231ENST00000488905 METAP1DQ6UB28 335 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-231ENST00000488905 GDPGP1Q6ZNW5 385 aa15.16■□□□□ 0.02
HDAC6-231ENST00000488905 C12orf43Q96C57 262 aaKnown RBP15.16■□□□□ 0.02
HDAC6-231ENST00000488905 RBM4BQ9BQ04 359 aaKnown RBP15.16■□□□□ 0.02
HDAC6-231ENST00000488905 PAPOLGQ9BWT3 736 aaKnown RBP15.16■□□□□ 0.02
HDAC6-231ENST00000488905 SEMA6AQ9H2E6 1030 aa15.16■□□□□ 0.02
HDAC6-231ENST00000488905 ZNRD1Q9P1U0 126 aa15.16■□□□□ 0.02
HDAC6-231ENST00000488905 ACOT8O14734 319 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 IFNGP01579 166 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 FBP1P09467 338 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 CFL1P23528 166 aaKnown RBP15.15■□□□□ 0.02
HDAC6-231ENST00000488905 BLVRAP53004 296 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 PPP1R8Q12972 351 aaKnown RBP15.15■□□□□ 0.02
HDAC6-231ENST00000488905 GFOD2Q3B7J2 385 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 SPATS1Q496A3 300 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 KLHL12Q53G59 568 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 LINC01590Q5TEZ4 76 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 C16orf89Q6UX73 402 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 CYP2R1Q6VVX0 501 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 PRSS45Q7RTY3 260 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 ERI1Q8IV48 349 aaKnown RBP15.15■□□□□ 0.02
HDAC6-231ENST00000488905 DEFB107AQ8IZN7 70 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 OR52H1Q8NGJ2 320 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 OR6N2Q8NGY6 317 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 RNF133Q8WVZ7 376 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 UBE2FQ969M7 185 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 SGK3Q96BR1 496 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 SEH1LQ96EE3 360 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 DMRTB1Q96MA1 342 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 INTS14Q96SY0 518 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 TLNRD1Q9H1K6 362 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 PPP1R3EQ9H7J1 279 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 SP140LQ9H930 580 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 SIRT7Q9NRC8 400 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 DNAJC27Q9NZQ0 273 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 TAGLN3Q9UI15 199 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 CAB39Q9Y376 341 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-231ENST00000488905 FAM96BQ9Y3D0 163 aa15.15■□□□□ 0.02
HDAC6-231ENST00000488905 RIIAD1A6NNX1 92 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 CDIPTO14735 213 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 APOC1P02654 83 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 ZNF3P17036 446 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 GNALP38405 381 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 NAA10P41227 235 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-231ENST00000488905 GSK3AP49840 483 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 ZNF121P58317 390 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-231ENST00000488905 IKZF1Q13422 519 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 TAF9Q16594 264 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 STUMQ69YW2 141 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 DHRS7BQ6IAN0 325 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-231ENST00000488905 Q6ZSV7 163 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 FAM57BQ71RH2 274 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 CMTM4Q8IZR5 234 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 ZSCAN4Q8NAM6 433 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-231ENST00000488905 CSNK2A3Q8NEV1 391 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 NPRL2Q8WTW4 380 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 ITPKCQ96DU7 683 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 ABHD6Q9BV23 337 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 DGCR6LQ9BY27 220 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 OR10A2Q9H208 303 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 CMC2Q9NRP2 79 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 ARL8BQ9NVJ2 186 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 NDE1Q9NXR1 346 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 ACTR3BQ9P1U1 418 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 VPREB3Q9UKI3 123 aa15.14■□□□□ 0.01
HDAC6-231ENST00000488905 PRPF19Q9UMS4 504 aaKnown RBP15.14■□□□□ 0.01
HDAC6-231ENST00000488905 BTBD17A6NE02 478 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 GPR37O15354 613 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 NDUFB3O43676 98 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 SELLP14151 372 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 GUCA2AQ02747 115 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 LRRC10Q5BKY1 277 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 FTMTQ8N4E7 242 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 C8orf46Q8TAG6 207 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 AMELYQ99218 206 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 MICU1Q9BPX6 476 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 DCTN5Q9BTE1 182 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 TCF7L1Q9HCS4 588 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 VNN3Q9NY84 501 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 ZNF319Q9P2F9 582 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 RHBDD3Q9Y3P4 386 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 U3KQV3 271 aa15.13■□□□□ 0.01
HDAC6-231ENST00000488905 A0A0G2JK05 382 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 NKX6-3A6NJ46 265 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 SLC22A31A6NKX4 558 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 ANXA2P2A6NMY6 339 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 RNASEK-C17orf49H0YIS7 233 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 AMY2BP19961 511 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 OPRL1P41146 370 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 MXRA7P84157 204 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 IL5RAQ01344 420 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms