RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 COPS3Q9UNS2 423 aa14.8□□□□□ -0.04
ITGB1-215ENST00000488494 OOEPA6NGQ2 149 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 EGR1P18146 543 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 PSMB10P40306 273 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 KCNJ8Q15842 424 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 KLF17Q5JT82 389 aaPredicted RBP14.79□□□□□ -0.04
ITGB1-215ENST00000488494 WDR25Q64LD2 544 aaPredicted RBP14.79□□□□□ -0.04
ITGB1-215ENST00000488494 KCTD18Q6PI47 426 aaPredicted RBP14.79□□□□□ -0.04
ITGB1-215ENST00000488494 ASRGL1Q7L266 308 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 GCSAMQ8N6F7 178 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 OR1M1Q8NGA1 313 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 DACT3Q96B18 629 aaPredicted RBP14.79□□□□□ -0.04
ITGB1-215ENST00000488494 IL4I1Q96RQ9 567 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 FAM206AQ9NX38 181 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 ENOPH1Q9UHY7 261 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 TENM1Q9UKZ4 2725 aa14.79□□□□□ -0.04
ITGB1-215ENST00000488494 IGHV3OR15-7A0A075B7D8 119 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 TRAV38-1A0A0B4J264 116 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 SAC3D1A6NKF1 404 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ANXA2P2A6NMY6 339 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ADAM20O43506 726 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 IL5RAQ01344 420 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ROM1Q03395 351 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 PAX8Q06710 450 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 PRDX4Q13162 271 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 SNCBQ16143 134 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 AADACL4Q5VUY2 407 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 NXNL2Q5VZ03 156 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ZNF841Q6ZN19 808 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 MEPCEQ7L2J0 689 aaKnown RBP14.78□□□□□ -0.04
ITGB1-215ENST00000488494 COMMD2Q86X83 199 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 FAM90A1Q86YD7 464 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 FAM81AQ8TBF8 368 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 LRRC29Q8WV35 223 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ZFAND2BQ8WV99 257 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 PYDC1Q8WXC3 89 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 RAB40AQ8WXH6 277 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ASB17Q8WXJ9 295 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ITPKCQ96DU7 683 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 CENPNQ96H22 339 aaPredicted RBP14.78□□□□□ -0.04
ITGB1-215ENST00000488494 OR8B4Q96RC9 309 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 RTL8AQ9BWD3 113 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 MROQ9BYG7 248 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 RIBC2Q9H4K1 309 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ADGRL4Q9HBW9 690 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 TRIM36Q9NQ86 728 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ZNF69Q9UC07 566 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 ZNF391Q9UJN7 358 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 IKZF2Q9UKS7 526 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 NUP50Q9UKX7 468 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 TMEM14AQ9Y6G1 99 aa14.78□□□□□ -0.04
ITGB1-215ENST00000488494 TMEM269A0A1B0GVZ9 245 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 SLC22A31A6NKX4 558 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 ZNF850A8MQ14 1090 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 C22orf46C9J442 243 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 GYPAP02724 150 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 FPR2P25090 351 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 MFGE8Q08431 387 aaPredicted RBP14.77□□□□□ -0.05
ITGB1-215ENST00000488494 ZNF829Q3KNS6 432 aaPredicted RBP14.77□□□□□ -0.05
ITGB1-215ENST00000488494 DEGS2Q6QHC5 323 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 WDR82Q6UXN9 313 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 GID4Q8IVV7 300 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 SLC35F2Q8IXU6 374 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 JMJD8Q96S16 334 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 PKP2Q99959 881 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 MICU1Q9BPX6 476 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 NUDT16L1Q9BRJ7 211 aaKnown RBP14.77□□□□□ -0.05
ITGB1-215ENST00000488494 GABARAPL3Q9BY60 117 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 SMURF1Q9HCE7 757 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 ESM1Q9NQ30 184 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 MPC1Q9Y5U8 109 aa14.77□□□□□ -0.05
ITGB1-215ENST00000488494 IGHV3OR16-10A0A075B7F0 116 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 TRAV40A0A0B4J280 105 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 ENSAO43768 121 aaKnown RBP14.76□□□□□ -0.05
ITGB1-215ENST00000488494 CST4P01036 141 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 LHBP01229 141 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 IGHV4-38-2P0DP08 117 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 NPY4RP50391 375 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 RIDAP52758 137 aaKnown RBP14.76□□□□□ -0.05
ITGB1-215ENST00000488494 ACTG1P63261 375 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 EFNB1P98172 346 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 POU4F2Q12837 409 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 TEX36Q5VZQ5 186 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 CCDC121Q6ZUS5 278 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 KCTD8Q6ZWB6 473 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 C11orf53Q8IXP5 236 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 ZNF679Q8IYX0 411 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 GALNT4Q8N4A0 578 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 HPSE2Q8WWQ2 592 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 OR5P3Q8WZ94 311 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 FGF23Q9GZV9 251 aaPredicted RBP14.76□□□□□ -0.05
ITGB1-215ENST00000488494 PBOV1Q9GZY1 135 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 TLNRD1Q9H1K6 362 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 RNPEPL1Q9HAU8 725 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 ABCB9Q9NP78 766 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 H2AFY2Q9P0M6 372 aaPredicted RBP14.76□□□□□ -0.05
ITGB1-215ENST00000488494 ERVK-18Q9QC07 812 aa14.76□□□□□ -0.05
ITGB1-215ENST00000488494 A0A0U1RQV5 110 aa14.75□□□□□ -0.05
ITGB1-215ENST00000488494 ACOD1A6NK06 481 aa14.75□□□□□ -0.05
ITGB1-215ENST00000488494 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms