RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 HHLA2Q9UM44 414 aa11.33□□□□□ -0.6
COL4A6-207ENST00000487645 MPC1Q9Y5U8 109 aa11.33□□□□□ -0.6
COL4A6-207ENST00000487645 SIRT4Q9Y6E7 314 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-207ENST00000487645 TANC2Q9HCD6 1990 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 ZNF816-ZNF321PA0A0X1KG74 233 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 LOC107986453A0A1B0GWG9 222 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 TNFAIP8O95379 198 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 ACHEP22303 614 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 CA6P23280 308 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 ATP5J2P56134 94 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 MRPS11P82912 194 aaKnown RBP11.32□□□□□ -0.6
COL4A6-207ENST00000487645 EMX1Q04741 257 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-207ENST00000487645 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 GPR50Q13585 617 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 MED22Q15528 200 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 OR8G1Q15617 311 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 XAF1Q6GPH4 301 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 ZNF773Q6PK81 442 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 SPARTQ8N0X7 666 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 CELF2-AS1Q8N7Q2 184 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 GTF3AQ92664 365 aaKnown RBP11.32□□□□□ -0.6
COL4A6-207ENST00000487645 SMIM19Q96E16 107 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 ELMOD3Q96FG2 381 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 OR5M11Q96RB7 305 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 NR1H4Q96RI1 486 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-207ENST00000487645 FOXC2Q99958 501 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 PDCD1LG2Q9BQ51 273 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 TPK1Q9H3S4 243 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 ACOT13Q9NPJ3 140 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 DECR2Q9NUI1 292 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 ENPP5Q9UJA9 477 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 PIGLQ9Y2B2 252 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 RHBDD3Q9Y3P4 386 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 NOTCH2Q04721 2471 aa11.32□□□□□ -0.6
COL4A6-207ENST00000487645 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-207ENST00000487645 MLNRO43193 412 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 IGHV4-39P01824 125 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 CELP19835 753 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 GNALP38405 381 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 MAGEB1P43366 347 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 MAP2K4P45985 399 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 CDH15P55291 814 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 CCL8P80075 99 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 TNFAIP6P98066 277 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-207ENST00000487645 TSTQ16762 297 aaKnown RBP11.31□□□□□ -0.6
COL4A6-207ENST00000487645 PRSS57Q6UWY2 283 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 PIGCQ92535 297 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 GHSRQ92847 366 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 PERPQ96FX8 193 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 MYOZ1Q9NP98 299 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-207ENST00000487645 ZNF281Q9Y2X9 895 aa11.31□□□□□ -0.6
COL4A6-207ENST00000487645 H0YL77 283 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 TPD52L2O43399 206 aaKnown RBP11.3□□□□□ -0.6
COL4A6-207ENST00000487645 NDUFS7O75251 213 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 NRASP01111 189 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 HLA-DPB1P04440 258 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 FAHP16930 419 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 TNFRSF1AP19438 455 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 PCMT1P22061 227 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 CD200P41217 278 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 SRP9P49458 86 aaKnown RBP11.3□□□□□ -0.6
COL4A6-207ENST00000487645 SLC3A1Q07837 685 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 MLLT11Q13015 90 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-207ENST00000487645 PRDX4Q13162 271 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 TPBGQ13641 420 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 TESK1Q15569 626 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 CLVS2Q5SYC1 327 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 TMEM42Q69YG0 159 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 ZNF367Q7RTV3 350 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 GPR148Q8TDV2 347 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 UBASH3BQ8TF42 649 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 PP6455Q8WZ26 134 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 FCGR1BQ92637 280 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 HIST1H2AAQ96QV6 131 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 MGLLQ99685 303 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 ADAT1Q9BUB4 502 aaKnown RBP11.3□□□□□ -0.6
COL4A6-207ENST00000487645 PAPOLGQ9BWT3 736 aaKnown RBP11.3□□□□□ -0.6
COL4A6-207ENST00000487645 CXXC4Q9H2H0 198 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 SAP30LQ9HAJ7 183 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 ZNF275Q9NSD4 429 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-207ENST00000487645 C14orf119Q9NWQ9 140 aa11.3□□□□□ -0.6
COL4A6-207ENST00000487645 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
COL4A6-207ENST00000487645 A0A087WXM4 84 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 ANXA2P2A6NMY6 339 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 ZNF850A8MQ14 1090 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 F5H5P2 479 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 SERPINA3P01011 423 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 HPXP02790 462 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 DAOP14920 347 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 CPEP16870 476 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 CRYBB2P43320 205 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 DSCR9P59020 149 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 DOC2BQ14184 412 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 CEACAM21Q3KPI0 293 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 UBE2UQ5VVX9 321 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 SHEQ5VZ18 495 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 MS4A15Q8N5U1 240 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 ZFP41Q8N8Y5 198 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 TSPAN14Q8NG11 270 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms