RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 MICU1Q9BPX6 476 aa17.06■□□□□ 0.32
HDAC4-209ENST00000487617 RIBC2Q9H4K1 309 aa17.06■□□□□ 0.32
HDAC4-209ENST00000487617 CLN8Q9UBY8 286 aa17.06■□□□□ 0.32
HDAC4-209ENST00000487617 ZNF391Q9UJN7 358 aa17.06■□□□□ 0.32
HDAC4-209ENST00000487617 IKZF2Q9UKS7 526 aa17.06■□□□□ 0.32
HDAC4-209ENST00000487617 DNHD1Q96M86 4753 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 TRAV38-1A0A0B4J264 116 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 TMEM269A0A1B0GVZ9 245 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 OOEPA6NGQ2 149 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 ACOD1A6NK06 481 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 ANXA2P2A6NMY6 339 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 PRR32B1ATL7 298 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 ZNF254O75437 659 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 FSHBP01225 129 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 ACKR3P25106 362 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 POLR2IP36954 125 aaKnown RBP17.05■□□□□ 0.32
HDAC4-209ENST00000487617 RIDAP52758 137 aaKnown RBP17.05■□□□□ 0.32
HDAC4-209ENST00000487617 ACTR3P61158 418 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 IL5RAQ01344 420 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 PAX2Q02962 417 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 ROM1Q03395 351 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 KPNB1Q14974 876 aaKnown RBP17.05■□□□□ 0.32
HDAC4-209ENST00000487617 GID4Q8IVV7 300 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 SLC35F2Q8IXU6 374 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 ZNF679Q8IYX0 411 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 BPIFB2Q8N4F0 458 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 OR1M1Q8NGA1 313 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 RAB40AQ8WXH6 277 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 OSBPL10Q9BXB5 764 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 TRIM36Q9NQ86 728 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 FAM206AQ9NX38 181 aa17.05■□□□□ 0.32
HDAC4-209ENST00000487617 IGHV2-70DA0A0C4DH43 119 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 ZNF850A8MQ14 1090 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 PHYHO14832 338 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 FPR2P25090 351 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 DCTDP32321 178 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 PSMB10P40306 273 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 CSNK2BP67870 215 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 PAX8Q06710 450 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 PRDX4Q13162 271 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 ZNF829Q3KNS6 432 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-209ENST00000487617 WDR25Q64LD2 544 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-209ENST00000487617 C11orf53Q8IXP5 236 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 GCSAMQ8N6F7 178 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 FAM81AQ8TBF8 368 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 LRRC29Q8WV35 223 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 PIGCQ92535 297 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 ITPKCQ96DU7 683 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 MNTQ99583 582 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 SLC6A7Q99884 636 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 PKP2Q99959 881 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 RBM4BQ9BQ04 359 aaKnown RBP17.04■□□□□ 0.32
HDAC4-209ENST00000487617 RTL8AQ9BWD3 113 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 SUCNR1Q9BXA5 334 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 GABARAPL3Q9BY60 117 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 RNPEPL1Q9HAU8 725 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 ADGRL4Q9HBW9 690 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 ABCB9Q9NP78 766 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 MPC1Q9Y5U8 109 aa17.04■□□□□ 0.32
HDAC4-209ENST00000487617 A0A0U1RQV5 110 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 ADAM20O43506 726 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 NDUFA2O43678 99 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 CST4P01036 141 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 LHBP01229 141 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 EGR1P18146 543 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 CXCR4P61073 352 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 ZNF322Q6U7Q0 402 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-209ENST00000487617 ZNF841Q6ZN19 808 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 USP43Q70EL4 1123 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 COMMD2Q86X83 199 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 GALNT4Q8N4A0 578 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 SEMA6DQ8NFY4 1073 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 C22orf15Q8WYQ4 148 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 TECTBQ96PL2 329 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 APOL4Q9BPW4 351 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 PBOV1Q9GZY1 135 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 HAO2Q9NYQ3 351 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 ERVK-18Q9QC07 812 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 CTSZQ9UBR2 303 aa17.03■□□□□ 0.32
HDAC4-209ENST00000487617 IGHV3OR15-7A0A075B7D8 119 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 ZNF670-ZNF695F2Z2N8 137 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 GYPAP02724 150 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 MAP2K3P46734 347 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 NPY4RP50391 375 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 HILS1P60008 231 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 ZFP1Q6P2D0 407 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 WDR82Q6UXN9 313 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 KCTD8Q6ZWB6 473 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 OR51G2Q8NGK0 314 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 OR5P3Q8WZ94 311 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 NUDT16L1Q9BRJ7 211 aaKnown RBP17.02■□□□□ 0.32
HDAC4-209ENST00000487617 CLN6Q9NWW5 311 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 WARS2Q9UGM6 360 aaKnown RBP17.02■□□□□ 0.32
HDAC4-209ENST00000487617 NUP50Q9UKX7 468 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 GTF2A1LQ9UNN4 478 aa17.02■□□□□ 0.32
HDAC4-209ENST00000487617 STAB1Q9NY15 2570 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 KIR2DS1A0A191URI9 304 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 H3BNX3 289 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 CDIPTO14735 213 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 TNFRSF13BO14836 293 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms