RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 CNOT2Q9NZN8 540 aaKnown RBP16.56■□□□□ 0.24
SEC22A-208ENST00000487572 CLEC2DQ9UHP7 191 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 RAB26Q9ULW5 256 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 PPP1R3CQ9UQK1 317 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 PIGLQ9Y2B2 252 aa16.56■□□□□ 0.24
SEC22A-208ENST00000487572 A0A1B0GTI1 187 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 A0A1B0GVI7 797 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 SLC1A7O00341 560 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 MTRF1O75570 445 aaKnown RBP16.55■□□□□ 0.24
SEC22A-208ENST00000487572 DHRS3O75911 302 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 FAHP16930 419 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 RIPPLY1Q0D2K3 151 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 PRDX4Q13162 271 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 MAB21L1Q13394 359 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 MED21Q13503 144 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 AVPI1Q5T686 147 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 OR2G6Q5TZ20 316 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 PRAMEF6Q5VXH4 476 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 TMPRSS11AQ6ZMR5 421 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 DOK3Q7L591 496 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 MOGAT3Q86VF5 341 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 RDH10Q8IZV5 341 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 KLHL36Q8N4N3 616 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 ZNF420Q8TAQ5 688 aaPredicted RBP16.55■□□□□ 0.24
SEC22A-208ENST00000487572 C18orf12Q96KH6 178 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 COX4I2Q96KJ9 171 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 NARFLQ9H6Q4 476 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 GCM1Q9NP62 436 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 UFSP2Q9NUQ7 469 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 DCAF16Q9NXF7 216 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 FRRS1LQ9P0K9 344 aa16.55■□□□□ 0.24
SEC22A-208ENST00000487572 CELSR1Q9NYQ6 3014 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 ZNF816-ZNF321PA0A0X1KG74 233 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 LOC107986453A0A1B0GWG9 222 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 CLDN25C9JDP6 229 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 PTGES3LE9PB15 166 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 E9PI62 339 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 SYT7O43581 403 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 UBCP0CG48 685 aaKnown RBP16.54■□□□□ 0.24
SEC22A-208ENST00000487572 ATP6V1B1P15313 513 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 USF1P22415 310 aaPredicted RBP16.54■□□□□ 0.24
SEC22A-208ENST00000487572 CD200P41217 278 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 GBX2P52951 348 aaPredicted RBP16.54■□□□□ 0.24
SEC22A-208ENST00000487572 TMEM33P57088 247 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 FDX2Q6P4F2 183 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 KLBQ86Z14 1044 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 TMEM106BQ9NUM4 274 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 SCN3BQ9NY72 215 aa16.54■□□□□ 0.24
SEC22A-208ENST00000487572 CAB39Q9Y376 341 aaPredicted RBP16.54■□□□□ 0.24
SEC22A-208ENST00000487572 CHD3Q12873 2000 aaKnown RBP16.53■□□□□ 0.24
SEC22A-208ENST00000487572 A0A096LNT2 108 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 IGHV4-61A0A0C4DH41 118 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 A6NIN4 97 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 ANXA2P2A6NMY6 339 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 CST4P01036 141 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 GRPP07492 148 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 INHBBP09529 407 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 CCL1P22362 96 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 C21orf33P30042 268 aaPredicted RBP16.53■□□□□ 0.24
SEC22A-208ENST00000487572 CSNK2BP67870 215 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 ALKBH1Q13686 389 aaKnown RBP16.53■□□□□ 0.24
SEC22A-208ENST00000487572 ZDHHC23Q8IYP9 409 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 SPERTQ8NA61 448 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 PLPP7Q8NBV4 271 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 OR14K1Q8NGZ2 314 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 GATAD2BQ8WXI9 593 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 PLEKHA1Q9HB21 404 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 FKBP14Q9NWM8 211 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 C14orf119Q9NWQ9 140 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 ENPP5Q9UJA9 477 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 PCDHGB5Q9Y5G0 923 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 MPC1Q9Y5U8 109 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 V9GYS6 101 aa16.53■□□□□ 0.24
SEC22A-208ENST00000487572 LOC100289279A0A1B0GTE1 492 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 LMX1BO60663 402 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 CCR9P51686 369 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 GTF2A1P52655 376 aaPredicted RBP16.52■□□□□ 0.24
SEC22A-208ENST00000487572 SLC3A1Q07837 685 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 MZT1Q08AG7 82 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 MRPL28Q13084 256 aaKnown RBP16.52■□□□□ 0.24
SEC22A-208ENST00000487572 MPPED2Q15777 294 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 DMRTC1Q5HYR2 192 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 CEP78Q5JTW2 689 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 CELF2-AS1Q8N7Q2 184 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 ZNF676Q8N7Q3 588 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 SGCDQ92629 289 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 ITPKCQ96DU7 683 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 TIMD4Q96H15 378 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 HIST1H2AAQ96QV6 131 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 MICU1Q9BPX6 476 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 Q9H521 79 aa16.52■□□□□ 0.24
SEC22A-208ENST00000487572 FLNAP21333 2647 aaKnown RBP16.52■□□□□ 0.23
SEC22A-208ENST00000487572 ISPDA4D126 451 aa16.51■□□□□ 0.23
SEC22A-208ENST00000487572 LRP5LA4QPB2 252 aa16.51■□□□□ 0.23
SEC22A-208ENST00000487572 A6NLC8 198 aa16.51■□□□□ 0.23
SEC22A-208ENST00000487572 OR4C45A6NMZ5 311 aa16.51■□□□□ 0.23
SEC22A-208ENST00000487572 WNT9BO14905 357 aa16.51■□□□□ 0.23
SEC22A-208ENST00000487572 MYL12BO14950 172 aa16.51■□□□□ 0.23
SEC22A-208ENST00000487572 CYB5R3P00387 301 aaPredicted RBP16.51■□□□□ 0.23
SEC22A-208ENST00000487572 FOSL1P15407 271 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms