RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 APOL3O95236 402 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DUX4L2P0CJ85 424 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DUX4L3P0CJ86 424 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DUX4L4P0CJ87 422 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DUX4L5P0CJ88 424 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DUX4L6P0CJ89 424 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DUX4L7P0CJ90 424 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DDOSTP39656 456 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 PRDX4Q13162 271 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 ARMCX4Q5H9R4 360 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DMRTC1Q5HYR2 192 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DUX4L9Q6RFH8 374 aaPredicted RBP13.21□□□□□ -0.29
GABPA-203ENST00000487266 ZNF841Q6ZN19 808 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 CCDC121Q6ZUS5 278 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 MEPCEQ7L2J0 689 aaKnown RBP13.21□□□□□ -0.29
GABPA-203ENST00000487266 NLRC3Q7RTR2 1065 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 OR1M1Q8NGA1 313 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 LRRC29Q8WV35 223 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 HPSE2Q8WWQ2 592 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DACT3Q96B18 629 aaPredicted RBP13.21□□□□□ -0.29
GABPA-203ENST00000487266 ITPKCQ96DU7 683 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 SEH1LQ96EE3 360 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 CENPNQ96H22 339 aaPredicted RBP13.21□□□□□ -0.29
GABPA-203ENST00000487266 OR8B4Q96RC9 309 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 PRRG3Q9BZD7 231 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 RGCCQ9H4X1 137 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 NIPAL2Q9H841 368 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 SP140LQ9H930 580 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 C14orf119Q9NWQ9 140 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 DUX4Q9UBX2 424 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 IKZF2Q9UKS7 526 aa13.21□□□□□ -0.29
GABPA-203ENST00000487266 IGHV2-70DA0A0C4DH43 119 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 TMEM269A0A1B0GVZ9 245 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 OOEPA6NGQ2 149 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 FSTL3O95633 263 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 GYPAP02724 150 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 CFL1P23528 166 aaKnown RBP13.2□□□□□ -0.3
GABPA-203ENST00000487266 GNALP38405 381 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 PSMB10P40306 273 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 CXCR4P61073 352 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 ACTR3P61158 418 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 NXNL2Q5VZ03 156 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 WDR25Q64LD2 544 aaPredicted RBP13.2□□□□□ -0.3
GABPA-203ENST00000487266 SSX6Q7RTT6 188 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 FAM90A1Q86YD7 464 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 SLC35F2Q8IXU6 374 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 FGFRL1Q8N441 504 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 SPERTQ8NA61 448 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 PLPP7Q8NBV4 271 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 CSNK2A3Q8NEV1 391 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 TECTBQ96PL2 329 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 TBX5Q99593 518 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 MRI1Q9BV20 369 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 OSBPL10Q9BXB5 764 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 GABARAPL3Q9BY60 117 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 MROQ9BYG7 248 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 RASSF4Q9H2L5 321 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 CLN8Q9UBY8 286 aa13.2□□□□□ -0.3
GABPA-203ENST00000487266 SOX21Q9Y651 276 aaPredicted RBP13.2□□□□□ -0.3
GABPA-203ENST00000487266 SLC22A31A6NKX4 558 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.19□□□□□ -0.3
GABPA-203ENST00000487266 CDIPTO14735 213 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 ADAM20O43506 726 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 IGHV4-38-2P0DP08 117 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 HILS1P60008 231 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 GMFBP60983 142 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 ROM1Q03395 351 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 PAX8Q06710 450 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 KCTD18Q6PI47 426 aaPredicted RBP13.19□□□□□ -0.3
GABPA-203ENST00000487266 ZNF322Q6U7Q0 402 aaPredicted RBP13.19□□□□□ -0.3
GABPA-203ENST00000487266 WDR82Q6UXN9 313 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 COMMD2Q86X83 199 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 ZNF679Q8IYX0 411 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 BCL6BQ8N143 479 aaPredicted RBP13.19□□□□□ -0.3
GABPA-203ENST00000487266 BPIFB2Q8N4F0 458 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 TEX29Q8N6K0 151 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 OR51G2Q8NGK0 314 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 ZNF418Q8TF45 676 aaPredicted RBP13.19□□□□□ -0.3
GABPA-203ENST00000487266 PIGCQ92535 297 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 FAM71F1Q96KD3 344 aaPredicted RBP13.19□□□□□ -0.3
GABPA-203ENST00000487266 APOL4Q9BPW4 351 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 PBOV1Q9GZY1 135 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 ESM1Q9NQ30 184 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 GPR84Q9NQS5 396 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 ZNF69Q9UC07 566 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 GTF2A1LQ9UNN4 478 aa13.19□□□□□ -0.3
GABPA-203ENST00000487266 EI24O14681 340 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 PHYHO14832 338 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 TNFRSF13BO14836 293 aaPredicted RBP13.18□□□□□ -0.3
GABPA-203ENST00000487266 SRSF10O75494 262 aaKnown RBP13.18□□□□□ -0.3
GABPA-203ENST00000487266 LHBP01229 141 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 TFF1P04155 84 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 MZT1Q08AG7 82 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 SCGB2A2Q13296 93 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 CEP78Q5JTW2 689 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 FAM81AQ8TBF8 368 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 OR51E1Q8TCB6 317 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 RAB40AQ8WXH6 277 aa13.18□□□□□ -0.3
GABPA-203ENST00000487266 RPL3LQ92901 407 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms