RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 RALGAPA1Q6GYQ0 2036 aa3.14□□□□□ -1.91
PTCD3-216ENST00000487043 IGHV2-70DA0A0C4DH43 119 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 PRORSD1PA6NEY8 169 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 EVPLLA8MZ36 301 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 SLC17A2O00624 439 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 NME4O00746 187 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 NBR2O15453 112 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 PHF1O43189 567 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF264O43296 627 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CHST10O43529 356 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 MGRN1O60291 552 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CTNSO60931 367 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 RHBDL1O75783 438 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 OR2B3O76000 313 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 DIRAS1O95057 198 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 GPR75O95800 540 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 AIFM1O95831 613 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 C6orf47O95873 294 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 IGHV3-13P01766 116 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 FOLR1P15328 257 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 GPX2P18283 190 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 IL1RNP18510 177 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CSNK2A2P19784 350 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 PPIBP23284 216 aaKnown RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 MPIP34949 423 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 GCKP35557 465 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 RPL13AP40429 203 aaKnown RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CDKN2CP42773 168 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 GZMMP51124 257 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 EFNB2P52799 333 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ATP1B3P54709 279 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 RAB38P57729 211 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 HBA1P69905 142 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ELF3P78545 371 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 LIPEQ05469 1076 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 BIKQ13323 160 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ILKQ13418 452 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CAPRIN1Q14444 709 aaKnown RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 TRIM16LQ309B1 348 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 SFT2D3Q587I9 215 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 OR2A2Q6IF42 318 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 FAM199XQ6PEV8 388 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 UQCC3Q6UW78 93 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF621Q6ZSS3 439 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 PRSS41Q7RTY9 318 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 NAXDQ8IW45 347 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 MSRB3Q8IXL7 192 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF440Q8IYI8 595 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CLECL1Q8IZS7 167 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CA13Q8N1Q1 262 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 TRIML2Q8N7C3 387 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 C17orf47Q8NEP4 570 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 OR4K14Q8NGD5 310 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 OR5T3Q8NGG3 340 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 OR4A15Q8NGL6 344 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 OR1L4Q8NGR5 311 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 VN1R17PQ8TDU5 208 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ZFP90Q8TF47 636 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CIDECQ96AQ7 238 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 EXOSC8Q96B26 276 aaKnown RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 C10orf35Q96D05 121 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ASB9Q96DX5 294 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF681Q96N22 645 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ECSITQ9BQ95 431 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 PKIBQ9C010 78 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 TRIM4Q9C037 500 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 RPF2Q9H7B2 306 aaKnown RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 TPT1P8Q9HAU6 139 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 FANCEQ9HB96 536 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 NANSQ9NR45 359 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 FBXO8Q9NRD0 319 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CUTCQ9NTM9 273 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 TAS2R9Q9NYW1 312 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ADA2Q9NZK5 511 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 RABL2AQ9UBK7 228 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF282Q9UDV7 671 aaPredicted RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 POMPQ9Y244 141 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 RASD1Q9Y272 281 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 AK6Q9Y3D8 172 aaKnown RBP3.13□□□□□ -1.91
PTCD3-216ENST00000487043 NEUROG3Q9Y4Z2 214 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 PPIAL4AQ9Y536 164 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF780BQ9Y6R6 833 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 SCN3AQ9NY46 2000 aa3.13□□□□□ -1.91
PTCD3-216ENST00000487043 CACNA1HO95180 2353 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 GPR179Q6PRD1 2367 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 CROCCQ5TZA2 2017 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 A0A1B0GX78 115 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF860A6NHJ4 632 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF716A6NP11 495 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 D6RAR5 112 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 TMX2-CTNND1H3BSU7 103 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 NVLO15381 856 aaKnown RBP3.12□□□□□ -1.91
PTCD3-216ENST00000487043 FKBP6O75344 327 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 ENTPD5O75356 428 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 RDH16O75452 317 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 SCRG1O75711 98 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 UGT2B17O75795 530 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 KBTBD11O94819 623 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 KRT75O95678 551 aa3.12□□□□□ -1.91
PTCD3-216ENST00000487043 IFI6P09912 130 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms