RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 GPR1P46091 355 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 GNG11P61952 73 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 RPL23P62829 140 aaKnown RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 CRADDP78560 199 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 CDK5Q00535 292 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 ZNF33AQ06730 810 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 ITGB3BPQ13352 177 aaPredicted RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 XRCC4Q13426 336 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 MAPRE2Q15555 327 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 HIKESHIQ53FT3 197 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 MPV17L2Q567V2 206 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 SAXO2Q658L1 398 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 ADNP2Q6IQ32 1131 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 RWDD4Q6NW29 188 aaKnown RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 C8orf74Q6P047 294 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 WDR82Q6UXN9 313 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 IFT20Q8IY31 132 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 LGI3Q8N145 548 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 ARRDC1Q8N5I2 433 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 TRIML2Q8N7C3 387 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 SPERTQ8NA61 448 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 OR10G6Q8NH81 332 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 ZNF461Q8TAF7 563 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 ITFG1Q8TB96 612 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 CA5BP1Q8WTZ4 195 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 CCDC12Q8WUD4 166 aaPredicted RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 RASSF5Q8WWW0 418 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 RAB1CQ92928 201 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 APH1AQ96BI3 265 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 RBMXL1Q96E39 390 aaKnown RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 NEURL3Q96EH8 262 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 SGTBQ96EQ0 304 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 RHOXF2Q9BQY4 288 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 SIKE1Q9BRV8 207 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 UPF3BQ9BZI7 483 aaKnown RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 SLIRPQ9GZT3 109 aaKnown RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 BLZF1Q9H2G9 400 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 C8orf33Q9H7E9 229 aaPredicted RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 WFDC1Q9HC57 220 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 RPRD1BQ9NQG5 326 aaKnown RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 CHRAC1Q9NRG0 131 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 MCUBQ9NWR8 336 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 GID8Q9NWU2 228 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 PEF1Q9UBV8 284 aaKnown RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 RTL1A6NKG5 1358 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 PTPRTO14522 1441 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 ERCC6Q03468 1493 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 TEX14Q8IWB6 1497 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 EFCAB5A4FU69 1503 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 PRDM15P57071 1507 aaPredicted RBP2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 EHBP1L1Q8N3D4 1523 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 ABCA10Q8WWZ4 1543 aa2.07□□□□□ -2.08
SNRNP27-204ENST00000487029 PTPN23Q9H3S7 1636 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 E9PCH4 1651 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 GCC2Q8IWJ2 1684 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 SMIM26A0A096LP01 95 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 LINC00854A0A1B0GVQ3 168 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 SMIM31A0A1B0GVY4 71 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 GMNCA6NCL1 334 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 CENPBD1B2RD01 187 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 ANKRD65E5RJM6 399 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 GOLGA8MH3BSY2 632 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 M0QX08 132 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 ZBTB5O15062 677 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 SIVA1O15304 175 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 YKT6O15498 198 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 CHST10O43529 356 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 STX10O60499 249 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 NMT2O60551 498 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 HSBP1O75506 76 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 SCELO95171 688 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 FARS2O95363 451 aaKnown RBP2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 TDP2O95551 362 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 TACSTD2P09758 323 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 ZNF688P0C7X2 276 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 CD37P11049 281 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 GFAPP14136 432 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 CD9P21926 228 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 MYL9P24844 172 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 HTR1DP28221 377 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 TALDO1P37837 337 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 KIR3DL2P43630 455 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 PPICP45877 212 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 CXCL12P48061 93 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 SLC11A1P49279 550 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 CCNG1P51959 295 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 GFERP55789 205 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 DAOAP59103 153 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 TAS2R46P59540 309 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 MRPS15P82914 257 aaKnown RBP2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 STX3Q13277 289 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 DOC2AQ14183 400 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 TFDP2Q14188 446 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 RBMY1FQ15415 496 aaKnown RBP2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 GABRA6Q16445 453 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 ZCWPW2Q504Y3 356 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 UNC93AQ86WB7 457 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 STX12Q86Y82 276 aa2.06□□□□□ -2.08
SNRNP27-204ENST00000487029 CMTM8Q8IZV2 173 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms