RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 AUNIPQ9H7T9 357 aa10.1□□□□□ -0.79
PRKCB-207ENST00000486868 TUBG2Q9NRH3 451 aa10.1□□□□□ -0.79
PRKCB-207ENST00000486868 MRPS28Q9Y2Q9 187 aaKnown RBP10.1□□□□□ -0.79
PRKCB-207ENST00000486868 NUBP2Q9Y5Y2 271 aa10.1□□□□□ -0.79
PRKCB-207ENST00000486868 ZNF407Q9C0G0 2248 aa10.1□□□□□ -0.79
PRKCB-207ENST00000486868 DNAJC13O75165 2243 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 TRAV18A0A075B6X5 111 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 A0A096LPE4 126 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 ZNF816-ZNF321PA0A0X1KG74 233 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 A0A1W2PPZ6 126 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 RAB27BO00194 218 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 SSX4O60224 188 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 CGAP01215 116 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 CSF1P09603 554 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 CD79AP11912 226 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 EDN3P14138 238 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 FAHP16930 419 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 SPINK2P20155 84 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 IGHV1-2P23083 117 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 ACKR3P25106 362 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 HLA-DMAP28067 261 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 APLNRP35414 380 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 FAUP35544 74 aaKnown RBP10.09□□□□□ -0.79
PRKCB-207ENST00000486868 PTGFRP43088 359 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 FUT6P51993 359 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 TMPRSS3P57727 454 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 ACTBP60709 375 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 ACTG1P63261 375 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 PMPCAQ10713 525 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 PLA2G7Q13093 441 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 MRPL49Q13405 166 aaKnown RBP10.09□□□□□ -0.79
PRKCB-207ENST00000486868 MADCAM1Q13477 382 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 GFOD2Q3B7J2 385 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 GLIPR1L1Q6UWM5 242 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 C1orf174Q8IYL3 243 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 IZUMO1Q8IYV9 350 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 GABRG1Q8N1C3 465 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 FAM89BQ8N5H3 189 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 CELF2-AS1Q8N7Q2 184 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 AQP3Q92482 292 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 ABHD17AQ96GS6 310 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 URM1Q9BTM9 101 aaKnown RBP10.09□□□□□ -0.79
PRKCB-207ENST00000486868 C12orf49Q9H741 205 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.09□□□□□ -0.79
PRKCB-207ENST00000486868 PCDHB16Q9NRJ7 776 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 KCNN3Q9UGI6 736 aa10.09□□□□□ -0.79
PRKCB-207ENST00000486868 LINC00854A0A1B0GVQ3 168 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 MEIOCA2RUB1 952 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 GMDSO60547 372 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 ZNF780AO75290 641 aaPredicted RBP10.08□□□□□ -0.8
PRKCB-207ENST00000486868 CA11O75493 328 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 CST4P01036 141 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 NRASP01111 189 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 LPLP06858 475 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 TPOP07202 933 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 GSTP1P09211 210 aaKnown RBP10.08□□□□□ -0.8
PRKCB-207ENST00000486868 TMIGD3P0DMS9 266 aaPredicted RBP10.08□□□□□ -0.8
PRKCB-207ENST00000486868 CBR1P16152 277 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 BTCP35070 178 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 UBE2NP61088 152 aaKnown RBP10.08□□□□□ -0.8
PRKCB-207ENST00000486868 ZNF92Q03936 586 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 UNC119Q13432 240 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 TNK1Q13470 666 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 GABRA6Q16445 453 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 ZNF260Q3ZCT1 412 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 C1orf185Q5T7R7 199 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 RTL6Q6ICC9 239 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 CRIP3Q6Q6R5 217 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 BIVMQ86UB2 503 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 ZNF584Q8IVC4 421 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 FTMTQ8N4E7 242 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 DTX3Q8N9I9 347 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 ZSCAN4Q8NAM6 433 aaPredicted RBP10.08□□□□□ -0.8
PRKCB-207ENST00000486868 PXT1Q8NFP0 134 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 STEAP2Q8NFT2 490 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 OR5M9Q8NGP3 310 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 FAM57AQ8TBR7 257 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 UBASH3BQ8TF42 649 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 GPER1Q99527 375 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 TM2D1Q9BX74 207 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 HRASLSQ9HDD0 168 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 IL36GQ9NZH8 169 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 NLKQ9UBE8 527 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 PROCRQ9UNN8 238 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 SLC7A11Q9UPY5 501 aa10.08□□□□□ -0.8
PRKCB-207ENST00000486868 CFAP54Q96N23 3096 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 C5orf49A4QMS7 147 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 ZNF503-AS2A6NEH8 195 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 HMX3A6NHT5 357 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 PRSS44E7EML9 344 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 INMT-MINDY4F8WBC2 141 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 K7EM74 188 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 CDC14BO60729 498 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 TNFSF13O75888 250 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 WISP2O76076 250 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 KDM4BO94953 1096 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 ZNF14P17017 642 aaPredicted RBP10.07□□□□□ -0.8
PRKCB-207ENST00000486868 CEACAM8P31997 349 aaPredicted RBP10.07□□□□□ -0.8
PRKCB-207ENST00000486868 RBP2P50120 134 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 ZP1P60852 638 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms