RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TEX30Q5JUR7 227 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 GSG1LQ6UXU4 331 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 MEX3BQ6ZN04 569 aaKnown RBP7.96□□□□□ -1.14
COL12A1-208ENST00000486533 TMUB2Q71RG4 321 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 HSD17B13Q7Z5P4 300 aaPredicted RBP7.96□□□□□ -1.14
COL12A1-208ENST00000486533 GPAT4Q86UL3 456 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 GPX8Q8TED1 209 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 ST8SIA1Q92185 356 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 SARAFQ96BY9 339 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 NUDT16L1Q9BRJ7 211 aaKnown RBP7.96□□□□□ -1.14
COL12A1-208ENST00000486533 SLC25A32Q9H2D1 315 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 C1orf198Q9H425 327 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF703Q9H7S9 590 aaPredicted RBP7.96□□□□□ -1.14
COL12A1-208ENST00000486533 PIPOXQ9P0Z9 390 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 FLVCR2Q9UPI3 526 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 B9D1Q9UPM9 204 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 FREM3P0C091 2139 aa7.96□□□□□ -1.14
COL12A1-208ENST00000486533 TMEM82A0PJX8 343 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 LRRC3CA6NJW4 275 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 RFPL4AA6NLU0 287 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 FAM171A2A8MVW0 826 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 RFPL4AL1F8VTS6 287 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 PSMD9O00233 223 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 GOSR2O14653 212 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 WNT11O96014 354 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ISG15P05161 165 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 SPARCP09486 303 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ADRA2CP18825 462 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 GDF1P27539 372 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 FBXW4P57775 412 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ADAM8P78325 824 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF117Q03924 483 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 EIF2B1Q14232 305 aaKnown RBP7.95□□□□□ -1.14
COL12A1-208ENST00000486533 MEP1BQ16820 701 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 C1orf140Q5VVS0 124 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 TMEM225Q6GV28 225 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 CHMP1BQ7LBR1 199 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 OVCH2Q7RTZ1 564 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 SLC36A1Q7Z2H8 476 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF584Q8IVC4 421 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 PM20D2Q8IYS1 436 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 PRR22Q8IZ63 422 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF295-AS1Q8N0V1 137 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 GABRG1Q8N1C3 465 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 C12orf45Q8N5I9 185 aaPredicted RBP7.95□□□□□ -1.14
COL12A1-208ENST00000486533 GATSQ8NAP1 163 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 OR51D1Q8NGF3 324 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 OR6K3Q8NGY3 331 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 OR52N5Q8NH56 324 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF519Q8TB69 540 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ZNRF4Q8WWF5 429 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 TAAR8Q969N4 342 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ARSGQ96EG1 525 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 LURAP1Q96LR2 239 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 SPOCK3Q9BQ16 436 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ARL6Q9H0F7 186 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 NXF5Q9H1B4 397 aaKnown RBP7.95□□□□□ -1.14
COL12A1-208ENST00000486533 SLC6A15Q9H2J7 730 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 MOB1AQ9H8S9 216 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 KCNJ16Q9NPI9 418 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ZC4H2Q9NQZ6 224 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 SDHAF2Q9NX18 166 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 ING1Q9UK53 422 aaPredicted RBP7.95□□□□□ -1.14
COL12A1-208ENST00000486533 GTF2A1LQ9UNN4 478 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 PLEKHA6Q9Y2H5 1048 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 KLHDC2Q9Y2U9 406 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 FAM215AQ9Y5M1 114 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 R4GMQ9 66 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 EXPH5Q8NEV8 1989 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 HCFC1P51610 2035 aa7.95□□□□□ -1.14
COL12A1-208ENST00000486533 TRAV8-7A0A075B6U6 113 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 FXYD6-FXYD2A0A087WZ82 144 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 TMED7-TICAM2A0A0A6YYA0 188 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 KANTRA0A1W2PQU2 76 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF736B4DX44 427 aaPredicted RBP7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ARPC5O15511 151 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 WDR1O75083 606 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ICOSLGO75144 302 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 TRAPPC6AO75865 159 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 OR2F2O95006 317 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ACSM4P0C7M7 580 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 NR2C1P13056 603 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 MGMTP16455 207 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 MPZP25189 248 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ABCD3P28288 659 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 KIR3DL2P43630 455 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 TAS2R31P59538 309 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 TLE4Q04727 773 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 EGR4Q05215 589 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ZP4Q12836 540 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 OR2F1Q13607 317 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ZNF345Q14585 488 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 HLXQ14774 488 aaPredicted RBP7.94□□□□□ -1.14
COL12A1-208ENST00000486533 C2orf76Q3KRA6 126 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 ACTBL2Q562R1 376 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 C1orf185Q5T7R7 199 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 FAHD2BQ6P2I3 314 aaPredicted RBP7.94□□□□□ -1.14
COL12A1-208ENST00000486533 TMEM65Q6PI78 240 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 KLHL24Q6TFL4 600 aa7.94□□□□□ -1.14
COL12A1-208ENST00000486533 TMEM17Q86X19 198 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms