RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 PCNX1Q96RV3 2341 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 RTTNQ86VV8 2226 aa12.68□□□□□ -0.38
POLR2J3-204ENST00000486319 GSTZ1O43708 216 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 PFDN1O60925 122 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 CNOT4O95628 575 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 ALDOBP05062 364 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 GLI4P10075 376 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 ANOS1P23352 680 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 CHRNB4P30926 498 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 GUSBP1Q15486 140 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 SNAI3Q3KNW1 292 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 ACSF3Q4G176 576 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 TMEM69Q5SWH9 247 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 MZT2BQ6NZ67 158 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 CCBE1Q6UXH8 406 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 NANOS1Q8WY41 292 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 PP6455Q8WZ26 134 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 PTX4Q96A99 478 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 SGK3Q96BR1 496 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 ZFP3Q96NJ6 502 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 CGGBP1Q9UFW8 167 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 LINC00854A0A1B0GVQ3 168 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 C5orf63A6NC05 138 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 ALX3O95076 343 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 HLA-HP01893 362 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 CD79AP11912 226 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 RAB1AP62820 205 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 MRPS10P82664 201 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 TGFBR3Q03167 851 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 PLP2Q04941 152 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 NSUN5P2Q63ZY6 315 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 ZNF57Q68EA5 555 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 TFAP2EQ6VUC0 442 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 CPEB3Q8NE35 698 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 OR52N4Q8NGI2 321 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 OR6K3Q8NGY3 331 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 PHF21AQ96BD5 680 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 REEP6Q96HR9 211 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 C1QTNF5Q9BXJ0 243 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 DIABLOQ9NR28 239 aa12.67□□□□□ -0.38
POLR2J3-204ENST00000486319 TMEM272A0A1B0GTI8 110 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 PLA2G10O15496 165 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 EEF1E1O43324 174 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 XRCC2O43543 280 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 IL18BPO95998 194 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 CDK2P24941 298 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 GRNP28799 593 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 ZNF93P35789 620 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 BCAP31P51572 246 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 HGFACQ04756 655 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 ZNF787Q6DD87 383 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 UTS2BQ765I0 119 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 NRARPQ7Z6K4 114 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 GCNT2Q8N0V5 402 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 OR5AS1Q8N127 324 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 C9orf106Q8NAJ2 232 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 SEMA6DQ8NFY4 1073 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 LILRB4Q8NHJ6 448 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 SMIM4Q8WVI0 70 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 AKAP1Q92667 903 aaKnown RBP eCLIP12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 BCL2L2Q92843 193 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 TRIM63Q969Q1 353 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 C11orf54Q9H0W9 315 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 CNTD2Q9H8S5 307 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 PIGLQ9Y2B2 252 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 RHBDD3Q9Y3P4 386 aa12.66□□□□□ -0.38
POLR2J3-204ENST00000486319 NBPF19A0A087WUL8 3843 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 A0A0G2JNJ9 132 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 FUOMA2VDF0 154 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 XRCC3O43542 346 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 CTAG2O75638 210 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 HCKP08631 526 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 RAB6AP20340 208 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 MAP2K3P46734 347 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 RFX2P48378 723 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 RIPPLY1Q0D2K3 151 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 IZUMO1Q8IYV9 350 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 OR4D6Q8NGJ1 314 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 YIPF5Q969M3 257 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 CHST5Q9GZS9 411 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 Q9UFV3 132 aa12.65□□□□□ -0.38
POLR2J3-204ENST00000486319 A0A0A6YYH2 397 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 MBD3L4A6NDZ8 208 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 MBD3L3A6NE82 208 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 MBD3L5A6NJ08 208 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 A6NJ64 397 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 CYSRT1A8MQ03 144 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 GABARAPH6UMI1 98 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 LDLRAD4O15165 306 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 LYRM1O43325 122 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 BPNT1O95861 308 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 PRF1P14222 555 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 SPNP16150 400 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 STOMP27105 288 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 KIR2DL2P43627 348 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 PTH2RP49190 550 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 TAS2R20P59543 309 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 GSG1Q2KHT4 349 aa12.64□□□□□ -0.39
POLR2J3-204ENST00000486319 COLCA1Q6ZS62 124 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms