RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 KDM4DQ6B0I6 523 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 PLPP7Q8NBV4 271 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 CSNK2A3Q8NEV1 391 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 OR1M1Q8NGA1 313 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 LRRC29Q8WV35 223 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 RAB40AQ8WXH6 277 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 PPP1R14AQ96A00 147 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 LYZL4Q96KX0 146 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 HIST1H2AAQ96QV6 131 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 NUDT16L1Q9BRJ7 211 aaKnown RBP14.73□□□□□ -0.05
COL6A1-204ENST00000486023 SUCNR1Q9BXA5 334 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 ERVK-18Q9QC07 812 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 OAZ3Q9UMX2 235 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 COPS3Q9UNS2 423 aa14.73□□□□□ -0.05
COL6A1-204ENST00000486023 POLR3KQ9Y2Y1 108 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-204ENST00000486023 A0A0A6YYJ9 748 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 TRAV38-1A0A0B4J264 116 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 IGHV2-70DA0A0C4DH43 119 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 ZAR1LA6NP61 321 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 CDIPTO14735 213 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 EGR1P18146 543 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 ACKR3P25106 362 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 PRDX4Q13162 271 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 DMRTC1Q5HYR2 192 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 RBMS3Q6XE24 437 aaKnown RBP14.72□□□□□ -0.05
COL6A1-204ENST00000486023 WDR86Q86TI4 376 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 BCL6BQ8N143 479 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-204ENST00000486023 FTMTQ8N4E7 242 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 GCSAMQ8N6F7 178 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 TMEM163Q8TC26 289 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 CENPNQ96H22 339 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-204ENST00000486023 FAM71F1Q96KD3 344 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-204ENST00000486023 RGCCQ9H4X1 137 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 NIPAL2Q9H841 368 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 ZNF69Q9UC07 566 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 NUP50Q9UKX7 468 aa14.72□□□□□ -0.05
COL6A1-204ENST00000486023 PRR32B1ATL7 298 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 HAX1O00165 279 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 PTBP3O95758 552 aaKnown RBP14.71□□□□□ -0.05
COL6A1-204ENST00000486023 RIDAP52758 137 aaKnown RBP14.71□□□□□ -0.05
COL6A1-204ENST00000486023 CXCR4P61073 352 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 ACTG1P63261 375 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 IL5RAQ01344 420 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 PAX8Q06710 450 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 KLF17Q5JT82 389 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-204ENST00000486023 PLEKHG7Q6ZR37 379 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 C11orf53Q8IXP5 236 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 SLC35F2Q8IXU6 374 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 SIGLECL1Q8N7X8 197 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 RPL3LQ92901 407 aaKnown RBP14.71□□□□□ -0.05
COL6A1-204ENST00000486023 SEH1LQ96EE3 360 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 DUS3LQ96G46 650 aaKnown RBP14.71□□□□□ -0.05
COL6A1-204ENST00000486023 RNF170Q96K19 258 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 DUX5Q96PT3 197 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 JMJD8Q96S16 334 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 TBX5Q99593 518 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 APOL4Q9BPW4 351 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 RTL8AQ9BWD3 113 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 MS4A7Q9GZW8 240 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-204ENST00000486023 PBOV1Q9GZY1 135 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 GABARAPL1Q9H0R8 117 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 TMEM14AQ9Y6G1 99 aa14.71□□□□□ -0.05
COL6A1-204ENST00000486023 SLC22A31A6NKX4 558 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 TRIM77I1YAP6 450 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 TMPRSS2O15393 492 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 APOL3O95236 402 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 IGHV4-38-2P0DP08 117 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 CPT2P23786 658 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 HILS1P60008 231 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 ELF3P78545 371 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-204ENST00000486023 SNCBQ16143 134 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 CEP78Q5JTW2 689 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 AADACL4Q5VUY2 407 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 NXNL2Q5VZ03 156 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 C12orf73Q69YU5 71 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF322Q6U7Q0 402 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF841Q6ZN19 808 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 ASRGL1Q7L266 308 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 THAP5Q7Z6K1 395 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF679Q8IYX0 411 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 SEMA6DQ8NFY4 1073 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 OR5T2Q8NGG2 359 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 OR51G2Q8NGK0 314 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 OR51E1Q8TCB6 317 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 ASB17Q8WXJ9 295 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 OR8B4Q96RC9 309 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 CCL13Q99616 98 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 PKP2Q99959 881 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 SNTG1Q9NSN8 517 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 FAM206AQ9NX38 181 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 CTSZQ9UBR2 303 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 ENOPH1Q9UHY7 261 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 MPC1Q9Y5U8 109 aa14.7□□□□□ -0.06
COL6A1-204ENST00000486023 SOX21Q9Y651 276 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-204ENST00000486023 KIR2DS1A0A191URI9 304 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF670-ZNF695F2Z2N8 137 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 PHYHO14832 338 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 RPP14O95059 124 aaKnown RBP14.69□□□□□ -0.06
COL6A1-204ENST00000486023 FSTL3O95633 263 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 FSHBP01225 129 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms