RNA–Protein interactions for RNA: ENST00000486007.1

NDUFA4-205, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 434 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-205ENST00000486007 NPFFO15130 113 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 POLR3GO15318 223 aaPredicted RBP4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 AHCYL1O43865 530 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 KRT34O76011 436 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 CD200P41217 278 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 RAD23AP54725 363 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 RAP1BP61224 184 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 RAP1AP62834 184 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 MAB21L1Q13394 359 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 AQP6Q13520 282 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 ALG10Q5BKT4 473 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 CLEC12AQ5QGZ9 265 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 C1orf94Q6P1W5 598 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 C1orf122Q6ZSJ8 110 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 BTN2A1Q7KYR7 527 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 VMO1Q7Z5L0 202 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 ZBTB46Q86UZ6 589 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 CALHM3Q86XJ0 350 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 NDUFA11Q86Y39 141 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 RBM45Q8IUH3 476 aaKnown RBP4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 MSRB3Q8IXL7 192 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 PDZD9Q8IXQ8 264 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 C10orf111Q8N326 155 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 KLHDC1Q8N7A1 406 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 C11orf44Q8N8P7 122 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 C11orf65Q8NCR3 313 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 GPR32P1Q8NGA4 272 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 LRRC8CQ8TDW0 803 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 TMEM239Q8WW34 195 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 RASSF5Q8WWW0 418 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 APOBEC3DQ96AK3 386 aaPredicted RBP4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 ECSITQ9BQ95 431 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 HCAR1Q9BXC0 346 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 POLR2J2Q9GZM3 115 aaKnown RBP4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 SLC22A4Q9H015 551 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 FAM234AQ9H0X4 552 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 POLR2J3Q9H1A7 115 aaKnown RBP4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 CENPHQ9H3R5 247 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 FN3KRPQ9HA64 309 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 RAB18Q9NP72 206 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 THAP1Q9NVV9 213 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 PTTG3PQ9NZH4 202 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 VAPAQ9P0L0 249 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 KAAG1Q9UBP8 84 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 RPUSD1Q9UJJ7 312 aaKnown RBP4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 FOXJ3Q9UPW0 622 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 MAB21L2Q9Y586 359 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 DNAH3Q8TD57 4116 aa4.38□□□□□ -1.71
NDUFA4-205ENST00000486007 A0A087WWL8 130 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 TRBV5-3A0A0A0MS03 114 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 OOEPA6NGQ2 149 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 H3BUX3 64 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 M0QX08 132 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 DVL1O14640 695 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 OR10H3O60404 316 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 PTBP3O95758 552 aaKnown RBP4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 OPN1SWP03999 348 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 HLA-DPB1P04440 258 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 KITP10721 976 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 SAA4P35542 130 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 MRPL19P49406 292 aaKnown RBP4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 STX1BP61266 288 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 LSM6P62312 80 aaKnown RBP4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 ACSM1Q08AH1 577 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 DCTN2Q13561 401 aaKnown RBP4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 OR8B8Q15620 311 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 AANATQ16613 207 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 NSUN5P1Q3KNT7 163 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 ZIK1Q3SY52 487 aaPredicted RBP4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 ANKDD1AQ495B1 522 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 DEFB121Q5J5C9 76 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 PGBD2Q6P3X8 592 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 COLCA1Q6ZS62 124 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 PATL1Q86TB9 770 aaKnown RBP4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 SPARTQ8N0X7 666 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 PAPD5Q8NDF8 572 aaKnown RBP4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 LY6G5BQ8NDX9 201 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 BHLHE23Q8NDY6 225 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 C19orf18Q8NEA5 215 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 WFDC9Q8NEX5 89 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 OR4D11Q8NGI4 311 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 OR1F12Q8NHA8 337 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 PFN4Q8NHR9 129 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 SLC26A7Q8TE54 656 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 TMEM255BQ8WV15 326 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 SLC7A6Q92536 515 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 B9D2Q9BPU9 175 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 TMEM109Q9BVC6 243 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 NPFFR1Q9GZQ6 430 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 HDHD2Q9H0R4 259 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 MMP28Q9H239 520 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 SEMA6AQ9H2E6 1030 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 IKZF5Q9H5V7 419 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 SIRT7Q9NRC8 400 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 C20orf141Q9NUB4 165 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 UFSP2Q9NUQ7 469 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 SIGLEC9Q9Y336 463 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 MED31Q9Y3C7 131 aa4.37□□□□□ -1.71
NDUFA4-205ENST00000486007 TEX13CA0A0J9YWL9 993 aa4.36□□□□□ -1.71
NDUFA4-205ENST00000486007 MEIOCA2RUB1 952 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms