RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 hCG_38984A0A1B0GV85 526 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 ACOT8O14734 319 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 MUC1P15941 1255 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-205ENST00000485397 AMY2BP19961 511 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 HSD11B1P28845 292 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 MAGEA2P43356 314 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 OCLNQ16625 522 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 C11orf91Q3C1V1 193 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 PRSS45Q7RTY3 260 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 LY6G5BQ8NDX9 201 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 OR6N2Q8NGY6 317 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 AMELYQ99218 206 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 ABHD6Q9BV23 337 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 SEMA6AQ9H2E6 1030 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 TOR3AQ9H497 397 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 MED20Q9H944 212 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 BRD7Q9NPI1 651 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 ONECUT1Q9UBC0 465 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 RHBDD3Q9Y3P4 386 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 U3KQV3 271 aa15.84■□□□□ 0.13
COL27A1-205ENST00000485397 TCRBV5S2A0A599 114 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 FAM183AA6NL82 134 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 CDIPTO14735 213 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 IFNGP01579 166 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 GSK3AP49840 483 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 ZNF121P58317 390 aaPredicted RBP15.83■□□□□ 0.12
COL27A1-205ENST00000485397 RPL15P61313 204 aaKnown RBP15.83■□□□□ 0.12
COL27A1-205ENST00000485397 MXRA7P84157 204 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 GFOD2Q3B7J2 385 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 ASPHD2Q6ICH7 369 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 ERI1Q8IV48 349 aaKnown RBP15.83■□□□□ 0.12
COL27A1-205ENST00000485397 OR5T2Q8NGG2 359 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 RNF133Q8WVZ7 376 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 INTS14Q96SY0 518 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 SIRT7Q9NRC8 400 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 ACTR3BQ9P1U1 418 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 DNAJB11Q9UBS4 358 aa15.83■□□□□ 0.12
COL27A1-205ENST00000485397 A0A1B0GVI7 797 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 RIIAD1A6NNX1 92 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 M0QZ24 198 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 SELLP14151 372 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 BLVRAP53004 296 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 DLX1P56177 255 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 GMFBP60983 142 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 IKZF1Q13422 519 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 MICAQ29983 383 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 SPATS1Q496A3 300 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 SLC36A1Q7Z2H8 476 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 PAPOLGQ9BWT3 736 aaKnown RBP15.82■□□□□ 0.12
COL27A1-205ENST00000485397 DGCR6LQ9BY27 220 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 SP140LQ9H930 580 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 CMC2Q9NRP2 79 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 NDE1Q9NXR1 346 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 FAM96BQ9Y3D0 163 aa15.82■□□□□ 0.12
COL27A1-205ENST00000485397 SAMHD1Q9Y3Z3 626 aaKnown RBP15.82■□□□□ 0.12
COL27A1-205ENST00000485397 A0A1W2PRD5 423 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 A0A1W2PRF3 423 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 A0A1W2PRM7 423 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 TIMM23O14925 209 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 NDUFB3O43676 98 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 TIPRLO75663 272 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 CLPXO76031 633 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 ZNF3P17036 446 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 GSTT1P30711 240 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 GNALP38405 381 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 NAA10P41227 235 aaPredicted RBP15.81■□□□□ 0.12
COL27A1-205ENST00000485397 TGM4P49221 684 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 PROK1P58294 105 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 TAF9Q16594 264 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 OR2T5Q6IEZ7 315 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 Q6ZSV7 163 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 IQCF1Q8N6M8 205 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 OR52H1Q8NGJ2 320 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 OR2T29Q8NH02 315 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 OTULINQ96BN8 352 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 ITPKCQ96DU7 683 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 PGAM5Q96HS1 289 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 NIPSNAP1Q9BPW8 284 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 MICU1Q9BPX6 476 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 RBM4BQ9BQ04 359 aaKnown RBP15.81■□□□□ 0.12
COL27A1-205ENST00000485397 TLNRD1Q9H1K6 362 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 OR10A2Q9H208 303 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 MMP27Q9H306 513 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 DPAGT1Q9H3H5 408 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 REEP1Q9H902 201 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 SNTG1Q9NSN8 517 aa15.81■□□□□ 0.12
COL27A1-205ENST00000485397 PRPF19Q9UMS4 504 aaKnown RBP15.81■□□□□ 0.12
COL27A1-205ENST00000485397 RNASEK-C17orf49H0YIS7 233 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 APOC1P02654 83 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 TFF1P04155 84 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 CFL1P23528 166 aaKnown RBP15.8■□□□□ 0.12
COL27A1-205ENST00000485397 OPRL1P41146 370 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 STUMQ69YW2 141 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 GDPGP1Q6ZNW5 385 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 TIGD4Q8IY51 512 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 GALNT4Q8N4A0 578 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 Q8N7P7 452 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 ZSCAN4Q8NAM6 433 aaPredicted RBP15.8■□□□□ 0.12
COL27A1-205ENST00000485397 CSNK2A3Q8NEV1 391 aa15.8■□□□□ 0.12
COL27A1-205ENST00000485397 RPL3LQ92901 407 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms