RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 SAR1BQ9Y6B6 198 aa4.21□□□□□ -1.74
PTPN4-210ENST00000485247 A0A1B0GWJ7 208 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 CENPBD1B2RD01 187 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 SEC14L6B5MCN3 397 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 PRR23D1E9PI22 279 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-210ENST00000485247 ACOT8O14734 319 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 SGCEO43556 437 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 TPST1O60507 370 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 PLIN3O60664 434 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 GLCEO94923 617 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 KRT75O95678 551 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 ASAH2BP0C7U1 165 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 PRR23D2P0DMB1 279 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-210ENST00000485247 BGNP21810 368 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 CA6P23280 308 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 COX7A1P24310 79 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 POU1F1P28069 291 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 GCAP28676 217 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 PRKAR1BP31321 381 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 S100A3P33764 101 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 CEBPDP49716 269 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-210ENST00000485247 MVDP53602 400 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 UGT2B15P54855 530 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 DSTNP60981 165 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 RPL23AP62750 156 aaKnown RBP4.2□□□□□ -1.74
PTPN4-210ENST00000485247 EMX2Q04743 252 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 RPL18Q07020 188 aaKnown RBP4.2□□□□□ -1.74
PTPN4-210ENST00000485247 SSX2Q16385 188 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 MICBQ29980 383 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 LRRC10Q5BKY1 277 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 ARMC4Q5T2S8 1044 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 TEX36Q5VZQ5 186 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 OTPQ5XKR4 325 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 SLC36A1Q7Z2H8 476 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 OR2W3Q7Z3T1 314 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 NANOGNBQ7Z5D8 188 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 PIGWQ7Z7B1 504 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 ZNF329Q86UD4 541 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 C10orf107Q8IVU9 208 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 MKXQ8IYA7 352 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 RPP25LQ8N5L8 163 aaKnown RBP4.2□□□□□ -1.74
PTPN4-210ENST00000485247 PCYOX1LQ8NBM8 494 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 KLHL30-AS1Q8NEE0 82 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 OR5D13Q8NGL4 314 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 ACMSDQ8TDX5 336 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 ACOT11Q8WXI4 607 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-210ENST00000485247 RFKQ969G6 155 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 SEH1LQ96EE3 360 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 PPP1R36Q96LQ0 422 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 HCAR1Q9BXC0 346 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 TINAGL1Q9GZM7 467 aaPredicted RBP4.2□□□□□ -1.74
PTPN4-210ENST00000485247 BTNL2Q9UIR0 455 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 ZNF229Q9UJW7 825 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 AURKCQ9UQB9 309 aa4.2□□□□□ -1.74
PTPN4-210ENST00000485247 A0A087WUV0 522 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-210ENST00000485247 A0A1W2PPM1 405 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 TMEM247A6NEH6 219 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 SH2D7A6NKC9 451 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-210ENST00000485247 E9PBE3 544 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 LDLRAD4O15165 306 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 TPST2O60704 377 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 TFF1P04155 84 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 HCKP08631 526 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 MUC1P15941 1255 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-210ENST00000485247 NDUFB7P17568 137 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 MSR1P21757 451 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 AQP2P41181 271 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 DAP3P51398 398 aaKnown RBP4.19□□□□□ -1.74
PTPN4-210ENST00000485247 NME5P56597 212 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 RGS8P57771 180 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-210ENST00000485247 SCRN3Q0VDG4 424 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 MAD2L1Q13257 205 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-210ENST00000485247 SELPLGQ14242 412 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 PCK2Q16822 640 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 ZNF260Q3ZCT1 412 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 CCDC153Q494R4 210 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 ABCA11PQ4W5N1 156 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 TTC33Q6PID6 262 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-210ENST00000485247 HDDC2Q7Z4H3 204 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 SPATA4Q8NEY3 305 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 OR5T2Q8NGG2 359 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 OR5M8Q8NGP6 311 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 OR9Q1Q8NGQ5 310 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 OR1F12Q8NHA8 337 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 TCP10LQ8TDR4 215 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 LRRC29Q8WV35 223 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 SPRYD4Q8WW59 207 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-210ENST00000485247 MAL2Q969L2 176 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 APOBEC3DQ96AK3 386 aaPredicted RBP4.19□□□□□ -1.74
PTPN4-210ENST00000485247 TESCQ96BS2 214 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 RBP7Q96R05 134 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 OR52E6Q96RD3 313 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 WFDC6Q9BQY6 131 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 SLCO1B3Q9NPD5 702 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 POLE4Q9NR33 117 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 INIPQ9NRY2 104 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 SNTG1Q9NSN8 517 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 ZDHHC18Q9NUE0 388 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 ASIC5Q9NY37 505 aa4.19□□□□□ -1.74
PTPN4-210ENST00000485247 ADA2Q9NZK5 511 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms