RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 APOL4Q9BPW4 351 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 RBM4BQ9BQ04 359 aaKnown RBP10.26□□□□□ -0.77
MSH5-216ENST00000484309 GABARAPL3Q9BY60 117 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 MROQ9BYG7 248 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 RGCCQ9H4X1 137 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 NIPAL2Q9H841 368 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 C14orf119Q9NWQ9 140 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 FAM206AQ9NX38 181 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 MIOXQ9UGB7 285 aa10.26□□□□□ -0.77
MSH5-216ENST00000484309 STAB1Q9NY15 2570 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 LGALS8O00214 317 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 ZNF12P17014 697 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 GATA3P23771 443 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 RIDAP52758 137 aaKnown RBP10.25□□□□□ -0.77
MSH5-216ENST00000484309 GMFBP60983 142 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 ELF3P78545 371 aaPredicted RBP10.25□□□□□ -0.77
MSH5-216ENST00000484309 MZT1Q08AG7 82 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 ZNF154Q13106 437 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 ZIK1Q3SY52 487 aaPredicted RBP10.25□□□□□ -0.77
MSH5-216ENST00000484309 DMRTC1Q5HYR2 192 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 ZNF322Q6U7Q0 402 aaPredicted RBP10.25□□□□□ -0.77
MSH5-216ENST00000484309 DCDC5Q6ZRR9 648 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 NLRC3Q7RTR2 1065 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 SSX6Q7RTT6 188 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 GID4Q8IVV7 300 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 C11orf53Q8IXP5 236 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 ZNF679Q8IYX0 411 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 GCSAMQ8N6F7 178 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 OR1M1Q8NGA1 313 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 FAM81AQ8TBF8 368 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 LRRC29Q8WV35 223 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 ITPKCQ96DU7 683 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 FAM71F1Q96KD3 344 aaPredicted RBP10.25□□□□□ -0.77
MSH5-216ENST00000484309 SLC6A7Q99884 636 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 C19orf24Q9BVV8 132 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 FGF23Q9GZV9 251 aaPredicted RBP10.25□□□□□ -0.77
MSH5-216ENST00000484309 PBOV1Q9GZY1 135 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 CTSZQ9UBR2 303 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 INSIG2Q9Y5U4 225 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 TMEM14AQ9Y6G1 99 aa10.25□□□□□ -0.77
MSH5-216ENST00000484309 IGHV3OR16-10A0A075B7F0 116 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 PPIAL4CA0A0B4J2A2 164 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 OOEPA6NGQ2 149 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 ANXA2P2A6NMY6 339 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 ZNF670-ZNF695F2Z2N8 137 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 ADAM20O43506 726 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 VENTXO95231 258 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 GYPAP02724 150 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 ROM1Q03395 351 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 ZNF829Q3KNS6 432 aaPredicted RBP10.24□□□□□ -0.77
MSH5-216ENST00000484309 ARMCX4Q5H9R4 360 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 LIPNQ5VXI9 398 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 DEGS2Q6QHC5 323 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 KCTD8Q6ZWB6 473 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 FAM90A1Q86YD7 464 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 SPATA3Q8NHX4 192 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 NANPQ8TBE9 248 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 OR51E1Q8TCB6 317 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 HPSE2Q8WWQ2 592 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 ASB17Q8WXJ9 295 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 UBE2FQ969M7 185 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 SEH1LQ96EE3 360 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 TECTBQ96PL2 329 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 MICU1Q9BPX6 476 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 RTL8AQ9BWD3 113 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 RASSF4Q9H2L5 321 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 GPR84Q9NQS5 396 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 CLN6Q9NWW5 311 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 CLN8Q9UBY8 286 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 POLR3KQ9Y2Y1 108 aaPredicted RBP10.24□□□□□ -0.77
MSH5-216ENST00000484309 AUP1Q9Y679 476 aa10.24□□□□□ -0.77
MSH5-216ENST00000484309 IGHV2-70DA0A0C4DH43 119 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 A0A1B0GW55 424 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 C22orf46C9J442 243 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 LOC110117498-PIK3R3F6TDL0 507 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 H3BSH0 61 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 CDIPTO14735 213 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 ZNF254O75437 659 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 SRSF10O75494 262 aaKnown RBP10.23□□□□□ -0.77
MSH5-216ENST00000484309 RPP14O95059 124 aaKnown RBP10.23□□□□□ -0.77
MSH5-216ENST00000484309 FSHBP01225 129 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 TTRP02766 147 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 ALPLP05186 524 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 DUX4L2P0CJ85 424 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 DUX4L3P0CJ86 424 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 DUX4L4P0CJ87 422 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 DUX4L5P0CJ88 424 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 DUX4L6P0CJ89 424 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 DUX4L7P0CJ90 424 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 FAHP16930 419 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 CDC42P60953 191 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 IL5RAQ01344 420 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 PAX2Q02962 417 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 ODF4Q2M2E3 257 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 CEP78Q5JTW2 689 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 WDR25Q64LD2 544 aaPredicted RBP10.23□□□□□ -0.77
MSH5-216ENST00000484309 ZFP1Q6P2D0 407 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 DUX4L9Q6RFH8 374 aaPredicted RBP10.23□□□□□ -0.77
MSH5-216ENST00000484309 WDR82Q6UXN9 313 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 ZNF841Q6ZN19 808 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms