RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SLCO4A1Q96BD0 722 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 CCDC124Q96CT7 223 aaKnown RBP5.17□□□□□ -1.58
PTCD3-215ENST00000484203 NRBF2Q96F24 287 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 NEIL1Q96FI4 390 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-215ENST00000484203 OR8B2Q96RD0 313 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 INTS14Q96SY0 518 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 DDOQ99489 341 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 THTPAQ9BU02 230 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 SSBP3Q9BWW4 388 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-215ENST00000484203 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 NMNAT2Q9BZQ4 307 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 OR10A2Q9H208 303 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 MMADHCQ9H3L0 296 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-215ENST00000484203 PNRC2Q9NPJ4 139 aaKnown RBP5.17□□□□□ -1.58
PTCD3-215ENST00000484203 MRPL22Q9NWU5 206 aaKnown RBP5.17□□□□□ -1.58
PTCD3-215ENST00000484203 TAS2R1Q9NYW7 299 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 PPIAL4AQ9Y536 164 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 CACNG2Q9Y698 323 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 COMMD3-BMI1R4GMX3 469 aa5.17□□□□□ -1.58
PTCD3-215ENST00000484203 CHD3Q12873 2000 aaKnown RBP5.17□□□□□ -1.58
PTCD3-215ENST00000484203 LOC105371242A0A075B767 164 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 TRAV38-1A0A0B4J264 116 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ACOD1A6NK06 481 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ANXA2P2A6NMY6 339 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 CEACAM18A8MTB9 384 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 PRR23D1E9PI22 279 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 F5H0A9 414 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 LGALS8O00214 317 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ACOT8O14734 319 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ENSAO43768 121 aaKnown RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ATP5HO75947 161 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 GLCEO94923 617 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ECDO95905 644 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 WNT2P09544 360 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 PRR23D2P0DMB1 279 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 OSMP13725 252 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ZNF12P17014 697 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 PYCR1P32322 319 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 GNALP38405 381 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 NAA10P41227 235 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 PITPNBP48739 271 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 COMPP49747 757 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ACTR3P61158 418 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 GNB2P62879 340 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ACTG1P63261 375 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 IL5RAQ01344 420 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 MS4A2Q01362 244 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 CRMP1Q14194 572 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 FLOT2Q14254 428 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 RSPO1Q2MKA7 263 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ZNF404Q494X3 552 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 SLC35D3Q5M8T2 416 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ZNF362Q5T0B9 420 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 DEGS2Q6QHC5 323 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 C12orf54Q6X4T0 127 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 MOGAT3Q86VF5 341 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ADGRG5Q8IZF4 528 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 BHLHE23Q8NDY6 225 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 OR10AD1Q8NGE0 317 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 OR8S1Q8NH09 359 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 BCAS4Q8TDM0 211 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 RNF133Q8WVZ7 376 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 RAB40AQ8WXH6 277 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 GCDHQ92947 438 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 SPSB4Q96A44 273 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 SLAMF6Q96DU3 332 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 SIGLEC11Q96RL6 698 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 FEVQ99581 238 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ADAT1Q9BUB4 502 aaKnown RBP5.16□□□□□ -1.58
PTCD3-215ENST00000484203 RNPEPL1Q9HAU8 725 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 TMEM165Q9HC07 324 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 CENPMQ9NSP4 180 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 ERVK-18Q9QC07 812 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 RNF7Q9UBF6 113 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 DNAJB9Q9UBS3 223 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 CLN8Q9UBY8 286 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 NUP50Q9UKX7 468 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 INSIG2Q9Y5U4 225 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 TMEM14AQ9Y6G1 99 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 U3KQV3 271 aa5.16□□□□□ -1.58
PTCD3-215ENST00000484203 KIR2DS1A0A191URI9 304 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 TVP23AA6NH52 213 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 F5H5P2 479 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 CLDN34H7C241 214 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 MLNRO43193 412 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF254O75437 659 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 SOX14O95416 240 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 GPANK1O95872 356 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 FSHBP01225 129 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 LYNP07948 512 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 H2BFMP0C1H6 154 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 T-ENOLP0DO92 83 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 FCGR1AP12314 374 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 ATP6V1B1P15313 513 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 MUC1P15941 1255 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 CPEP16870 476 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 CA6P23280 308 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 ZFP36P26651 326 aaKnown RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 POU1F1P28069 291 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 CFHR2P36980 270 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms