RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TMEM56Q96MV1 263 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 MBOAT7Q96N66 472 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 RDH12Q96NR8 316 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF184Q99676 751 aaPredicted RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 ARHGDIGQ99819 225 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 C20orf144Q9BQM9 153 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 GABARAPL3Q9BY60 117 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 YTHDF1Q9BYJ9 559 aaKnown RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 ARL6Q9H0F7 186 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 Q9H3A6 140 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 PANK3Q9H999 370 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 RHOFQ9HBH0 211 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 SH2D2AQ9NP31 389 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 MED4Q9NPJ6 270 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 IL37Q9NZH6 218 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 COMMD9Q9P000 198 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 DHRS4-AS1Q9P1J3 65 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 TRMT112Q9UI30 125 aaKnown RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 RAB22AQ9UL26 194 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 ZNF257Q9Y2Q1 563 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 SAMHD1Q9Y3Z3 626 aaKnown RBP3.41□□□□□ -1.86
PTCD3-214ENST00000483925 LRRC42Q9Y546 428 aa3.41□□□□□ -1.86
PTCD3-214ENST00000483925 IGLV8-61A0A075B6I0 122 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 F5H768 121 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 LINC01619G3V211 115 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 CCRL2O00421 344 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 XKRYO14609 159 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 MAGEB4O15481 346 aaPredicted RBP3.4□□□□□ -1.87
PTCD3-214ENST00000483925 ASS1P00966 412 aaKnown RBP3.4□□□□□ -1.87
PTCD3-214ENST00000483925 IGLV2-11P01706 119 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 CALB1P05937 261 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 CD1EP15812 388 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 BTCP35070 178 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 MYCNOSP40205 109 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 SLCO1A2P46721 670 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 SLC25A1P53007 311 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 NUP107P57740 925 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 MTPNP58546 118 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 CD300CQ08708 224 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 TSPAN31Q12999 210 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 RUNX3Q13761 415 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 KIAA0087Q14695 138 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 C2CD6Q53TS8 623 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
PTCD3-214ENST00000483925 SPOPLQ6IQ16 392 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 MOB1BQ7L9L4 216 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 UBAC2Q8NBM4 344 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 OR10G9Q8NGN4 311 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 OR5M1Q8NGP8 315 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 LRRC29Q8WV35 223 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 NELFBQ8WX92 580 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 RGP1Q92546 391 aaPredicted RBP3.4□□□□□ -1.87
PTCD3-214ENST00000483925 OPTNQ96CV9 577 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 GALNT14Q96FL9 552 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 MRAP2Q96G30 205 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 RBP7Q96R05 134 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 NODALQ96S42 347 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 STACQ99469 402 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 TEAD3Q99594 435 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 GPR22Q99680 433 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 C19orf24Q9BVV8 132 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 DEFB127Q9H1M4 99 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 LHX5Q9H2C1 402 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 RGS18Q9NS28 235 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 ANXA10Q9UJ72 324 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 SIGLEC9Q9Y336 463 aa3.4□□□□□ -1.87
PTCD3-214ENST00000483925 IGLV1-36A0A0B4J1U3 117 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 IGHV3-35A0A0C4DH35 117 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 A0A1W2PQL4 384 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-214ENST00000483925 E5RI56 91 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 PFDN6O15212 129 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 ACOX3O15254 700 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 BIRC5O15392 142 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 LYPLA2O95372 231 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 THY1P04216 161 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 ISG15P05161 165 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 MMP7P09237 267 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-214ENST00000483925 CCDC166P0CW27 439 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 SLC2A1P11166 492 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 PSMB9P28065 219 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 IDH2P48735 452 aaKnown RBP3.39□□□□□ -1.87
PTCD3-214ENST00000483925 RPS23P62266 143 aaKnown RBP3.39□□□□□ -1.87
PTCD3-214ENST00000483925 IRX1P78414 480 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-214ENST00000483925 CCL7P80098 99 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 IL5RAQ01344 420 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 NAB1Q13506 487 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 OR1Q1Q15612 314 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 TBC1D28Q2M2D7 210 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 SLC25A35Q3KQZ1 300 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 CDNFQ49AH0 187 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 ACTBL2Q562R1 376 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 AVPI1Q5T686 147 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 DNM1P34Q6PK57 102 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 SLC13A5Q86YT5 568 aaPredicted RBP3.39□□□□□ -1.87
PTCD3-214ENST00000483925 FAM71E2Q8N5Q1 922 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 PIFOQ8TCI5 191 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 IL22RA2Q969J5 263 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 HAUS1Q96CS2 278 aa3.39□□□□□ -1.87
PTCD3-214ENST00000483925 DDIT4LQ96D03 193 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms