RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 NIPSNAP3BQ9BS92 247 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 MS4A8Q9BY19 250 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 NMNAT2Q9BZQ4 307 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SMDT1Q9H4I9 107 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 MKKSQ9NPJ1 570 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 PLSCR4Q9NRQ2 329 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 MYO7AQ13402 2215 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SDK1Q7Z5N4 2213 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 CLDN34H7C241 214 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 CYB5AP00167 134 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF7P17097 686 aaPredicted RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 APOBEC1P41238 236 aaKnown RBP6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SLC11A1P49279 550 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 CLDN18P56856 261 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 PFN3P60673 137 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 S100A10P60903 97 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 RND3P61587 244 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 CATSPERDQ86XM0 798 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF679Q8IYX0 411 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 NRSN1Q8IZ57 195 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 TMEM40Q8WWA1 233 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 DIO2Q92813 273 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 EID2BQ96D98 161 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 MS4A6EQ96DS6 147 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 LGR4Q9BXB1 951 aa6.97□□□□□ -1.29
COL4A5-205ENST00000483338 SAP18O00422 153 aaKnown RBP6.96□□□□□ -1.29
COL4A5-205ENST00000483338 PRH1P02810 166 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 MAS1P04201 325 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 CD1AP06126 327 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 CXCR1P25024 350 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 BIDP55957 195 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 TAS2R50P59544 299 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 NANOS3P60323 173 aaKnown RBP6.96□□□□□ -1.29
COL4A5-205ENST00000483338 FBXW12Q6X9E4 464 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 COMMD6Q7Z4G1 85 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 DEFB128Q7Z7B8 93 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 TMEM150AQ86TG1 271 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 ZNF683Q8IZ20 524 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 SELENOHQ8IZQ5 122 aaKnown RBP6.96□□□□□ -1.29
COL4A5-205ENST00000483338 TMEM255BQ8WV15 326 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 OR6C1Q96RD1 312 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 CABLES2Q9BTV7 478 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 OR52D1Q9H346 318 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 ZDHHC6Q9H6R6 413 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 SGK2Q9HBY8 427 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 TAAR2Q9P1P5 351 aa6.96□□□□□ -1.29
COL4A5-205ENST00000483338 TRAV8-7A0A075B6U6 113 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 SMIM35A0A1B0GVV1 85 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 GPRIN2O60269 458 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 TUBG1P23258 451 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 RPL12P30050 165 aaKnown RBP6.96□□□□□ -1.3
COL4A5-205ENST00000483338 FCGR2CP31995 323 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 VIPR2P41587 438 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 RPS13P62277 151 aaKnown RBP6.96□□□□□ -1.3
COL4A5-205ENST00000483338 RAB11BQ15907 218 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 FAM78AQ5JUQ0 283 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 TPTE2P1Q5T6R2 138 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 FAM71E1Q6IPT2 247 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 FAM151BQ6UXP7 276 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 MCEMP1Q8IX19 187 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 SYS1Q8N2H4 156 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 COX18Q8N8Q8 333 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 OR56A1Q8NGH5 318 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 GPR146Q96CH1 333 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 KLHDC3Q9BQ90 382 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 SH3BGRL3Q9H299 93 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 TUBG2Q9NRH3 451 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 KLK13Q9UKR3 277 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 KCNK6Q9Y257 313 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 RCL1Q9Y2P8 373 aaKnown RBP6.96□□□□□ -1.3
COL4A5-205ENST00000483338 TRAV30A0A087WSZ9 112 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 VSTM2BA6NLU5 285 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 THY1P04216 161 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 CD55P08174 381 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 SEC11BP0C7V7 166 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM225BP0DP42 221 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 LAMP2P13473 410 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 RHOQP17081 205 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 CD52P31358 61 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 SOX2P48431 317 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 RANP62826 216 aaKnown RBP6.96□□□□□ -1.3
COL4A5-205ENST00000483338 ADAM8P78325 824 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 HLA-DRB3P79483 266 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 MORN2Q502X0 79 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 OPN5Q6U736 354 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 C17orf78Q8N4C9 275 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 ZDHHC22Q8N966 263 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 LFNGQ8NES3 379 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 OR2AJ1Q8NGZ0 328 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 AQP3Q92482 292 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 DYRK2Q92630 601 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 MS4A10Q96PG2 267 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 CMC2Q9NRP2 79 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 TMEM242Q9NWH2 141 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 KLHL28Q9NXS3 571 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 PLXNB2O15031 1838 aa6.96□□□□□ -1.3
COL4A5-205ENST00000483338 FGF17O60258 216 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 STK17BO94768 372 aa6.95□□□□□ -1.3
COL4A5-205ENST00000483338 PDGFBP01127 241 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms