RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 OR4Q3Q8NH05 313 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 OR4K13Q8NH42 304 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 NSMAFQ92636 917 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 C8orf49Q96NF6 230 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 OR5M11Q96RB7 305 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 GABARAPL3Q9BY60 117 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 MRPL13Q9BYD1 178 aaKnown RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 PLA2G12AQ9BZM1 189 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 DNTTIP1Q9H147 329 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 SYT4Q9H2B2 425 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 RERGLQ9H628 205 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 RNF121Q9H920 327 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 SEC61A2Q9H9S3 476 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 CMC2Q9NRP2 79 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF275Q9NSD4 429 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 IMPAD1Q9NX62 359 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 TVP23BQ9NYZ1 205 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 VSX1Q9NZR4 365 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-209ENST00000479532 UBQLN2Q9UHD9 624 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 FBXL3Q9UKT7 428 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 TBC1D24Q9ULP9 559 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 HIVEP3Q5T1R4 2406 aa5.39□□□□□ -1.55
SF3B1-209ENST00000479532 NBASA2RRP1 2371 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 A0A1B0GVI7 797 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 PRSS29PA6NIE9 313 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 OR5H1A6NKK0 313 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 ZAR1LA6NP61 321 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 A8MXK9 166 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 H7C1C5 153 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 TSPAN4O14817 238 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SURF4O15260 269 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MPZL2O60487 215 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MITFO75030 526 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 UBL3O95164 117 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 GOSR1O95249 250 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SLC2A10O95528 541 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 RAB36O95755 333 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 LALBAP00709 142 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 PTHP01270 115 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 HLA-DQA2P01906 255 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 IGFBP1P08833 259 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 OR8G3PP0DMU2 310 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 CD79AP11912 226 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF823P16415 610 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SPI1P17947 270 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 RAB4AP20338 218 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MSR1P21757 451 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 EDNRAP25101 427 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 LAP3P28838 519 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 CALCRP30988 508 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 NUP62P37198 522 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 CDKN2AP42771 156 aaKnown RBP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF133P52736 654 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SLC25A1P53007 311 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 ISL1P61371 349 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 PCBD1P61457 104 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 TSPAN5P62079 268 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 LCN6P62502 163 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 ARF1P84077 181 aaKnown RBP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 EMX1Q04741 257 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 FGL1Q08830 312 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 CDSNQ15517 529 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 GABRA6Q16445 453 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SGCAQ16586 387 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 HIST3H3Q16695 136 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MICBQ29980 383 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 ZIK1Q3SY52 487 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SLC36A2Q495M3 483 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 PHYHD1Q5SRE7 291 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 LCN1P1Q5VSP4 162 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SLC25A47Q6Q0C1 308 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 METAP1DQ6UB28 335 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SLC16A14Q7RTX9 510 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 COMMD7Q86VX2 200 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 IQCF1Q8N6M8 205 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 ZNF565Q8N9K5 539 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SLC37A3Q8NCC5 494 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 PROKR2Q8NFJ6 384 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 OR1M1Q8NGA1 313 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 OR52N5Q8NH56 324 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 FAM222BQ8WU58 562 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 AKAP1Q92667 903 aaKnown RBP eCLIP5.38□□□□□ -1.55
SF3B1-209ENST00000479532 PHF21AQ96BD5 680 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 S100PBPQ96BU1 408 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MUS81Q96NY9 551 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 NMNAT3Q96T66 252 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 KCNS3Q9BQ31 491 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MND1Q9BWT6 205 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MEGF9Q9H1U4 602 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 NELFAQ9H3P2 528 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 TOR3AQ9H497 397 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MSL2Q9HCI7 577 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SLC17A5Q9NRA2 495 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 PLSCR3Q9NRY6 295 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 PLCXD1Q9NUJ7 323 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 TMEM38BQ9NVV0 291 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 ERVK-18Q9QC07 812 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 SLC45A2Q9UMX9 530 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 ING4Q9UNL4 249 aa5.38□□□□□ -1.55
SF3B1-209ENST00000479532 MOKQ9UQ07 419 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms