RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 TRAV38-1A0A0B4J264 116 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 A0A0U1RQV5 110 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 OOEPA6NGQ2 149 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 ZNF254O75437 659 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 CST4P01036 141 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 RPS7P62081 194 aaKnown RBP19.51■□□□□ 0.71
C9orf3-215ENST00000478473 FAM76BQ5HYJ3 339 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 NXNL2Q5VZ03 156 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 OR1M1Q8NGA1 313 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 ASB17Q8WXJ9 295 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 LYZL4Q96KX0 146 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 KAAG1Q9UBP8 84 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 RHBDD3Q9Y3P4 386 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 ANK2Q01484 3957 aa19.51■□□□□ 0.71
C9orf3-215ENST00000478473 MITFO75030 526 aaPredicted RBP19.5■□□□□ 0.71
C9orf3-215ENST00000478473 IGLV3-1P01715 115 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 GRPP07492 148 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 ACKR3P25106 362 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 BTNL3Q6UXE8 466 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 ZNF826PQ6ZT77 177 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 C9orf139Q6ZV77 190 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 ZNF679Q8IYX0 411 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.5■□□□□ 0.71
C9orf3-215ENST00000478473 OR8B12Q8NGG6 310 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 OR8S1Q8NH09 359 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 TMEM163Q8TC26 289 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 MNTQ99583 582 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 SLC6A7Q99884 636 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 FAM206AQ9NX38 181 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 CTSZQ9UBR2 303 aa19.5■□□□□ 0.71
C9orf3-215ENST00000478473 HCCSP53701 268 aa19.49■□□□□ 0.71
C9orf3-215ENST00000478473 HOXA4Q00056 320 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-215ENST00000478473 IL5RAQ01344 420 aa19.49■□□□□ 0.71
C9orf3-215ENST00000478473 ARMCX4Q5H9R4 360 aa19.49■□□□□ 0.71
C9orf3-215ENST00000478473 MEPCEQ7L2J0 689 aaKnown RBP19.49■□□□□ 0.71
C9orf3-215ENST00000478473 KRT77Q7Z794 578 aa19.49■□□□□ 0.71
C9orf3-215ENST00000478473 BPIFB2Q8N4F0 458 aa19.49■□□□□ 0.71
C9orf3-215ENST00000478473 C19orf18Q8NEA5 215 aa19.49■□□□□ 0.71
C9orf3-215ENST00000478473 CENPNQ96H22 339 aaPredicted RBP19.49■□□□□ 0.71
C9orf3-215ENST00000478473 OR8B4Q96RC9 309 aa19.49■□□□□ 0.71
C9orf3-215ENST00000478473 OSBPL10Q9BXB5 764 aa19.49■□□□□ 0.71
C9orf3-215ENST00000478473 BRD7Q9NPI1 651 aa19.49■□□□□ 0.71
C9orf3-215ENST00000478473 SLC22A31A6NKX4 558 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 PRR32B1ATL7 298 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 TRIM77I1YAP6 450 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 PLATP00750 562 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 ATP6V1B1P15313 513 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 MUC1P15941 1255 aaPredicted RBP19.48■□□□□ 0.71
C9orf3-215ENST00000478473 COMPP49747 757 aaPredicted RBP19.48■□□□□ 0.71
C9orf3-215ENST00000478473 WDR82Q6UXN9 313 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 DOK3Q7L591 496 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 AMIGO2Q86SJ2 522 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 FAM90A1Q86YD7 464 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 ZDHHC22Q8N966 263 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 LRTOMTQ8WZ04 291 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 MROQ9BYG7 248 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 PPP1R3EQ9H7J1 279 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 ESM1Q9NQ30 184 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 ERVK-18Q9QC07 812 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 ZNF69Q9UC07 566 aa19.48■□□□□ 0.71
C9orf3-215ENST00000478473 A6NLC8 198 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 TMEM210A6NLX4 147 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 C22orf46C9J442 243 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-215ENST00000478473 GNALP38405 381 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 CD276Q5ZPR3 534 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 SFRP4Q6FHJ7 346 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-215ENST00000478473 TCEANCQ8N8B7 351 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 OR10Z1Q8NGY1 313 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 OR5P3Q8WZ94 311 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 C12orf43Q96C57 262 aaKnown RBP19.47■□□□□ 0.71
C9orf3-215ENST00000478473 CNN2Q99439 309 aaKnown RBP19.47■□□□□ 0.71
C9orf3-215ENST00000478473 CIB1Q99828 191 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 MICU1Q9BPX6 476 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 NUDT16L1Q9BRJ7 211 aaKnown RBP19.47■□□□□ 0.71
C9orf3-215ENST00000478473 PAPOLGQ9BWT3 736 aaKnown RBP19.47■□□□□ 0.71
C9orf3-215ENST00000478473 GABARAPL3Q9BY60 117 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 ADGRL4Q9HBW9 690 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 COPS3Q9UNS2 423 aa19.47■□□□□ 0.71
C9orf3-215ENST00000478473 TMEM269A0A1B0GVZ9 245 aa19.46■□□□□ 0.71
C9orf3-215ENST00000478473 ANXA2P2A6NMY6 339 aa19.46■□□□□ 0.71
C9orf3-215ENST00000478473 SRRM5B3KS81 715 aa19.46■□□□□ 0.71
C9orf3-215ENST00000478473 C3orf80F5H4A9 247 aa19.46■□□□□ 0.71
C9orf3-215ENST00000478473 ENSAO43768 121 aaKnown RBP19.46■□□□□ 0.71
C9orf3-215ENST00000478473 SRSF10O75494 262 aaKnown RBP19.46■□□□□ 0.71
C9orf3-215ENST00000478473 LIPFP07098 398 aa19.46■□□□□ 0.71
C9orf3-215ENST00000478473 EGR1P18146 543 aa19.46■□□□□ 0.71
C9orf3-215ENST00000478473 GFOD2Q3B7J2 385 aa19.46■□□□□ 0.71
C9orf3-215ENST00000478473 ZBTB37Q5TC79 503 aa19.46■□□□□ 0.71
C9orf3-215ENST00000478473 NUFIP1Q9UHK0 495 aaKnown RBP19.46■□□□□ 0.71
C9orf3-215ENST00000478473 TMEM89A2RUT3 159 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 ADAM20O43506 726 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 FCN3O75636 299 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 MRPL3P09001 348 aaKnown RBP19.45■□□□□ 0.7
C9orf3-215ENST00000478473 CSNK2BP67870 215 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 PRDX4Q13162 271 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 Q6ZSR3 168 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 BCDIN3DQ7Z5W3 292 aaKnown RBP19.45■□□□□ 0.7
C9orf3-215ENST00000478473 GID4Q8IVV7 300 aa19.45■□□□□ 0.7
C9orf3-215ENST00000478473 HPSE2Q8WWQ2 592 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms