RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ARMCX4Q5H9R4 360 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 LINC01590Q5TEZ4 76 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 FBXW12Q6X9E4 464 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 SHFQ7M4L6 423 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 SLC16A9Q7RTY1 509 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 EGFL6Q8IUX8 553 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ERI1Q8IV48 349 aaKnown RBP7□□□□□ -1.29
HDAC6-221ENST00000477561 SLC35F2Q8IXU6 374 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 RAB2BQ8WUD1 216 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ITLN1Q8WWA0 313 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 RAB1CQ92928 201 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 SPTSSAQ969W0 71 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 SLAMF6Q96DU3 332 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF799Q96GE5 643 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 C1orf159Q96HA4 380 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 OR2V2Q96R30 315 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 DIRC2Q96SL1 478 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 MGLLQ99685 303 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 ALG8Q9BVK2 526 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 C1QTNF5Q9BXJ0 243 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 YIPF3Q9GZM5 350 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 RBM38Q9H0Z9 239 aaKnown RBP7□□□□□ -1.29
HDAC6-221ENST00000477561 TMEM160Q9NX00 188 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 CGGBP1Q9UFW8 167 aaPredicted RBP7□□□□□ -1.29
HDAC6-221ENST00000477561 CLEC2DQ9UHP7 191 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 KCNG2Q9UJ96 466 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 TMEM14AQ9Y6G1 99 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 CEPT1Q9Y6K0 416 aa7□□□□□ -1.29
HDAC6-221ENST00000477561 MALRD1Q5VYJ5 2156 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 DNHD1Q96M86 4753 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 J3QW42 95 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 CCRL2O00421 344 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 MLNRO43193 412 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF205O95201 554 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 IFNA2P01563 188 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 HLA-DPB1P04440 258 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 ADH4P08319 380 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 LIMS3P0CW19 117 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 LIMS4P0CW20 117 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 SLC2A1P11166 492 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 SELEP16581 610 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 CD36P16671 472 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 SRD5A1P18405 259 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 NAA10P41227 235 aaPredicted RBP6.99□□□□□ -1.29
HDAC6-221ENST00000477561 TAS2R43P59537 309 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 SRSF2Q01130 221 aaKnown RBP6.99□□□□□ -1.29
HDAC6-221ENST00000477561 BDH1Q02338 343 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 ACSM1Q08AH1 577 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 MALLQ13021 153 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 MRPL28Q13084 256 aaKnown RBP6.99□□□□□ -1.29
HDAC6-221ENST00000477561 EIF2B1Q14232 305 aaKnown RBP6.99□□□□□ -1.29
HDAC6-221ENST00000477561 SNAI3Q3KNW1 292 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 GPR107Q5VW38 600 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF322Q6U7Q0 402 aaPredicted RBP6.99□□□□□ -1.29
HDAC6-221ENST00000477561 COLCA1Q6ZS62 124 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 PGAP1Q75T13 922 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 DPY19L4Q7Z388 723 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 LHFPL3Q86UP9 236 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 GLCCI1Q86VQ1 547 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 ANKRD13BQ86YJ7 626 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 SYS1Q8N2H4 156 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF283Q8N7M2 679 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 OR8G5Q8NG78 346 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 OR6N2Q8NGY6 317 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 OR13G1Q8NGZ3 307 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 OR2AE1Q8NHA4 323 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 HAVCR2Q8TDQ0 301 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 UFD1Q92890 307 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 TMEM186Q96B77 213 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 YIPF6Q96EC8 236 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 TIMD4Q96H15 378 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 OR5M11Q96RB7 305 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 INTS14Q96SY0 518 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 KCNJ15Q99712 375 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 GAL3ST1Q99999 423 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF665Q9H7R5 613 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 MARCH7Q9H992 704 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 TRIM36Q9NQ86 728 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 TMEM106BQ9NUM4 274 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 HIF1ANQ9NWT6 349 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 LPAR3Q9UBY5 353 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 IL19Q9UHD0 177 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 ENPP5Q9UJA9 477 aa6.99□□□□□ -1.29
HDAC6-221ENST00000477561 LSM2Q9Y333 95 aaKnown RBP6.99□□□□□ -1.29
HDAC6-221ENST00000477561 FBN1P35555 2871 aaKnown RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 A0A1W2PQL4 384 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 IQCF6A8MYZ5 107 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 F5H5P2 479 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 PLPP2O43688 288 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 SELENOFO60613 162 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 GABARAPO95166 117 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 CYB5R3P00387 301 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 IGHV2-5P01817 119 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 MSMBP08118 114 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 TNFRSF1AP19438 455 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 HNF1AP20823 631 aa6.98□□□□□ -1.29
HDAC6-221ENST00000477561 SRP14P37108 136 aaKnown RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 GBX2P52951 348 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 DVL1P1P54792 670 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-221ENST00000477561 ZNF85Q03923 595 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms