RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 FRRS1Q6ZNA5 592 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 Q6ZRG5 221 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TIPARPQ7Z3E1 657 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 GALNTL5Q7Z4T8 443 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 MDGA2Q7Z553 956 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 C5orf24Q7Z6I8 188 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TMED4Q7Z7H5 227 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SCD5Q86SK9 330 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM150AQ86TG1 271 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 LINC01551Q86U37 167 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 CPOQ8IVL8 374 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TCEAL8Q8IYN2 117 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 PRSS58Q8IYP2 241 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF683Q8IZ20 524 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 BCL6BQ8N143 479 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 MTURNQ8N3F0 131 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 DEFB123Q8N688 67 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SIRT6Q8N6T7 355 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 COX18Q8N8Q8 333 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 BMPERQ8N8U9 685 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 BOLLQ8N9W6 283 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SLC38A9Q8NBW4 561 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 NOXO1Q8NFA2 376 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 OR4S1Q8NGB4 309 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 OR4D9Q8NGE8 314 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 OR56A1Q8NGH5 318 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 OR13C2Q8NGS9 318 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 OR2V1Q8NHB1 315 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 CD300LFQ8TDQ1 290 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 AUTS2Q8WXX7 1259 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 ISOC2Q96AB3 205 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF707Q96C28 371 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 BPIFA2Q96DR5 249 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 FBXO17Q96EF6 278 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 WDR34Q96EX3 536 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 C16orf58Q96GQ5 468 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 GAL3ST4Q96RP7 486 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 CD180Q99467 661 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TIMP4Q99727 224 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 ARHGDIGQ99819 225 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SMOQ99835 787 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 NIPSNAP3BQ9BS92 247 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 EFCAB11Q9BUY7 163 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 RNF126Q9BV68 326 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SELENOIQ9C0D9 397 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 RAB33BQ9H082 229 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 CSTL1Q9H114 145 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SLC26A1Q9H2B4 701 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TCEAL2Q9H3H9 227 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 FBXO44Q9H4M3 255 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 ISG20L2Q9H9L3 353 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 CDH20Q9HBT6 801 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 LPAR2Q9HBW0 351 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 HINT3Q9NQE9 182 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SLC2A9Q9NRM0 540 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TDP1Q9NUW8 608 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 KIAA1456Q9P272 454 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 IL19Q9UHD0 177 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SH2B3Q9UQQ2 575 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SCML2Q9UQR0 700 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 MRPS33Q9Y291 106 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 AK6Q9Y3D8 172 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 YIPF1Q9Y548 306 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 HS3ST4Q9Y661 456 aa4.18□□□□□ -1.74
PTCD3-212ENST00000477520 SIRT4Q9Y6E7 314 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 YLPM1P49750 1951 aaKnown RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 TP53BP1Q12888 1972 aaPredicted RBP4.18□□□□□ -1.74
PTCD3-212ENST00000477520 MYLKQ15746 1914 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 TRAV30A0A087WSZ9 112 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 CXorf51AA0A1B0GTR3 108 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 A0A1W2PPE2 198 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM235A6NFC5 223 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 EPOPA6NHQ4 379 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 ZNF705GA8MUZ8 300 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-212ENST00000477520 HIDE1A8MVS5 230 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 TMEM238C9JI98 176 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 F6UZH7 168 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 AGRPO00253 132 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 CLDN5O00501 218 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 CCL22O00626 93 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 CDIPTO14735 213 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 CYB5BO43169 146 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 KCNAB3O43448 404 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 TCF21O43680 179 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 SOCS5O75159 536 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 TNFSF15O95150 251 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 PPP1R3DO95685 299 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 ABHD16AO95870 558 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 GPANK1O95872 356 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 CYB5R3P00387 301 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-212ENST00000477520 HPRT1P00492 218 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 AMBPP02760 352 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 TRGC2P03986 189 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 IFNA6P05013 189 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 ARG1P05089 322 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 DCNP07585 359 aaKnown RBP4.17□□□□□ -1.74
PTCD3-212ENST00000477520 IGFBP1P08833 259 aaPredicted RBP4.17□□□□□ -1.74
PTCD3-212ENST00000477520 POU2F2P09086 479 aa4.17□□□□□ -1.74
PTCD3-212ENST00000477520 SNRPCP09234 159 aaKnown RBP4.17□□□□□ -1.74
PTCD3-212ENST00000477520 OR4Q2P0C623 313 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms