RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 FOXL1Q12952 345 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 SLC9A3R2Q15599 337 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 C11orf91Q3C1V1 193 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 TMEM236Q5W0B7 351 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 FAM90A1Q86YD7 464 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 GALNT4Q8N4A0 578 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 CSNK2A3Q8NEV1 391 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 BBS1Q8NFJ9 593 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 NRBF2Q96F24 287 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 PGAM5Q96HS1 289 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 DUX5Q96PT3 197 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 RASSF4Q9H2L5 321 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 MMADHCQ9H3L0 296 aaPredicted RBP8.96□□□□□ -0.98
SEC13-214ENST00000476597 PPP1R3EQ9H7J1 279 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 SLC25A19Q9HC21 320 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 BRD7Q9NPI1 651 aa8.96□□□□□ -0.98
SEC13-214ENST00000476597 TRAV40A0A0B4J280 105 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 hCG_1807616A0A1W2PRN6 198 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 ZNF879B4DU55 563 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 FCN3O75636 299 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 MMP9P14780 707 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 MUC1P15941 1255 aaPredicted RBP8.95□□□□□ -0.98
SEC13-214ENST00000476597 ALOX5APP20292 161 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 ACKR3P25106 362 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 GNALP38405 381 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 NAA10P41227 235 aaPredicted RBP8.95□□□□□ -0.98
SEC13-214ENST00000476597 HCCSP53701 268 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 CRISP1P54107 249 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 SNCBQ16143 134 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 SNAPC1Q16533 368 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 GFOD2Q3B7J2 385 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 FAM76BQ5HYJ3 339 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 WDR82Q6UXN9 313 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 KRT74Q7RTS7 529 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 DNAJC9Q8WXX5 260 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 UTP4Q969X6 686 aaKnown RBP8.95□□□□□ -0.98
SEC13-214ENST00000476597 ITPKCQ96DU7 683 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 TECTBQ96PL2 329 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 TEAD3Q99594 435 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 MICU1Q9BPX6 476 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 TEX12Q9BXU0 123 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 CADM1Q9BY67 442 aaKnown RBP8.95□□□□□ -0.98
SEC13-214ENST00000476597 TLNRD1Q9H1K6 362 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 NIPAL2Q9H841 368 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 SMURF1Q9HCE7 757 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 TVP23BQ9NYZ1 205 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 ZNF391Q9UJN7 358 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 KLHDC2Q9Y2U9 406 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 MPC1Q9Y5U8 109 aa8.95□□□□□ -0.98
SEC13-214ENST00000476597 IGHV3OR15-7A0A075B7D8 119 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 ACOD1A6NK06 481 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 ZNF850A8MQ14 1090 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.94□□□□□ -0.98
SEC13-214ENST00000476597 P2RY10O00398 339 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 DVL1O14640 695 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 CDIPTO14735 213 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 ECDO95905 644 aaPredicted RBP8.94□□□□□ -0.98
SEC13-214ENST00000476597 CST4P01036 141 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 DAPP51397 102 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 RPS7P62081 194 aaKnown RBP8.94□□□□□ -0.98
SEC13-214ENST00000476597 CSNK2BP67870 215 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 IL5RAQ01344 420 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 APOFQ13790 326 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 PTGES3Q15185 160 aaKnown RBP8.94□□□□□ -0.98
SEC13-214ENST00000476597 MICBQ29980 383 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 DEFB112Q30KQ8 113 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 ATPAF1Q5TC12 328 aaPredicted RBP8.94□□□□□ -0.98
SEC13-214ENST00000476597 GPR157Q5UAW9 335 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 FAHD1Q6P587 224 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 DEGS2Q6QHC5 323 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 BRD3OSQ6XYD6 125 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 BTN2A1Q7KYR7 527 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 FTMTQ8N4E7 242 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 PNLDC1Q8NA58 520 aaKnown RBP8.94□□□□□ -0.98
SEC13-214ENST00000476597 SGMS2Q8NHU3 365 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 LRRC29Q8WV35 223 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 OR5P3Q8WZ94 311 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 SLC25A28Q96A46 364 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 LYZL4Q96KX0 146 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 WDFY2Q96P53 400 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 TBX15Q96SF7 602 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 CCL13Q99616 98 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 PCGF1Q9BSM1 259 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 ZNF747Q9BV97 191 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 PAPOLGQ9BWT3 736 aaKnown RBP8.94□□□□□ -0.98
SEC13-214ENST00000476597 YIPF3Q9GZM5 350 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 PAPOLBQ9NRJ5 636 aaKnown RBP8.94□□□□□ -0.98
SEC13-214ENST00000476597 LAMP5Q9UJQ1 280 aa8.94□□□□□ -0.98
SEC13-214ENST00000476597 CENPVL3A0A0U1RRI6 287 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 CCDC182A6NF36 153 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 ANXA2P2A6NMY6 339 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 SRRM5B3KS81 715 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 TMPRSS2O15393 492 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 TOX4O94842 621 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 SFTPBP07988 381 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 AMY2BP19961 511 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 DCTDP32321 178 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 TGM4P49221 684 aa8.93□□□□□ -0.98
SEC13-214ENST00000476597 PSMA6P60900 246 aaKnown RBP8.93□□□□□ -0.98
SEC13-214ENST00000476597 ESRRGP62508 458 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms