RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ATP6V1E1P36543 226 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 ZNF154Q13106 437 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 TMED1Q13445 227 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 MICBQ29980 383 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 THAP5Q7Z6K1 395 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 AMIGO2Q86SJ2 522 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 PHC2Q8IXK0 858 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 BOLLQ8N9W6 283 aaKnown RBP8.56□□□□□ -1.04
CCM2-208ENST00000476594 BBS1Q8NFJ9 593 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 OR8J1Q8NGP2 316 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 RAB3IPQ96QF0 476 aaPredicted RBP8.56□□□□□ -1.04
CCM2-208ENST00000476594 SEMA6AQ9H2E6 1030 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 IMPAD1Q9NX62 359 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 HAO2Q9NYQ3 351 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 WARS2Q9UGM6 360 aaKnown RBP8.56□□□□□ -1.04
CCM2-208ENST00000476594 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCM2-208ENST00000476594 OAZ3Q9UMX2 235 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 INSIG2Q9Y5U4 225 aa8.56□□□□□ -1.04
CCM2-208ENST00000476594 STAB1Q9NY15 2570 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 ZNF816-ZNF321PA0A0X1KG74 233 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 PRKYO43930 277 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 ZNF205O95201 554 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 LIPFP07098 398 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 MUC1P15941 1255 aaPredicted RBP8.55□□□□□ -1.04
CCM2-208ENST00000476594 ADRA2CP18825 462 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 ZFP36P26651 326 aaKnown RBP8.55□□□□□ -1.04
CCM2-208ENST00000476594 ROM1Q03395 351 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 EGR3Q06889 387 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 MPPED2Q15777 294 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 ZBTB37Q5TC79 503 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 C12orf73Q69YU5 71 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 ZNF322Q6U7Q0 402 aaPredicted RBP8.55□□□□□ -1.04
CCM2-208ENST00000476594 KCTD8Q6ZWB6 473 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 ASRGL1Q7L266 308 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 PRSS45Q7RTY3 260 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 SLC36A1Q7Z2H8 476 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 SLC35F2Q8IXU6 374 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 ZDHHC23Q8IYP9 409 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 GALNT4Q8N4A0 578 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 DEFB108BQ8NET1 73 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 SEMA6DQ8NFY4 1073 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 OR1M1Q8NGA1 313 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 OR8B12Q8NGG6 310 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 RAB40AQ8WXH6 277 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 TECTBQ96PL2 329 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 OR8B4Q96RC9 309 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 AMELYQ99218 206 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 CIB1Q99828 191 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 C19orf24Q9BVV8 132 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 GABARAPL3Q9BY60 117 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 RIBC2Q9H4K1 309 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 ZMAT3Q9HA38 289 aaKnown RBP8.55□□□□□ -1.04
CCM2-208ENST00000476594 CLN6Q9NWW5 311 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 NUP50Q9UKX7 468 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 GTF2A1LQ9UNN4 478 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 DNHD1Q96M86 4753 aa8.55□□□□□ -1.04
CCM2-208ENST00000476594 IGHV2-70DA0A0C4DH43 119 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 CCDC182A6NF36 153 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 NKX6-3A6NJ46 265 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 C3orf80F5H4A9 247 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 LOC110117498-PIK3R3F6TDL0 507 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 ADAM20O43506 726 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 MITFO75030 526 aaPredicted RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 ECDO95905 644 aaPredicted RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 CST4P01036 141 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 KRT8P05787 483 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 PMELP40967 661 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 BPIFB3P59826 476 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 HILS1P60008 231 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 CXCR4P61073 352 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 SEC61A1P61619 476 aaKnown RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 RIPPLY1Q0D2K3 151 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 PRDX4Q13162 271 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 KRTAP24-1Q3LI83 254 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 BCL2L15Q5TBC7 163 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 AADACL4Q5VUY2 407 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 WDR25Q64LD2 544 aaPredicted RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 FAM220AQ7Z4H9 259 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 PNLDC1Q8NA58 520 aaKnown RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 OR10Z1Q8NGY1 313 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 LRRC29Q8WV35 223 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 TRUB1Q8WWH5 349 aaKnown RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 PYDC1Q8WXC3 89 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 PIGCQ92535 297 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 DVL3Q92997 716 aaPredicted RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 C12orf43Q96C57 262 aaKnown RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 MRPL48Q96GC5 212 aaKnown RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 IL4I1Q96RQ9 567 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 NUDT16L1Q9BRJ7 211 aaKnown RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 MS4A7Q9GZW8 240 aaPredicted RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 PBOV1Q9GZY1 135 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 DNAJB11Q9UBS4 358 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 NUFIP1Q9UHK0 495 aaKnown RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 ENPP5Q9UJA9 477 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 RHBDD3Q9Y3P4 386 aa8.54□□□□□ -1.04
CCM2-208ENST00000476594 FBN1P35555 2871 aaKnown RBP8.54□□□□□ -1.04
CCM2-208ENST00000476594 SAC3D1A6NKF1 404 aa8.53□□□□□ -1.04
CCM2-208ENST00000476594 OR5B21A6NL26 309 aa8.53□□□□□ -1.04
CCM2-208ENST00000476594 ZNF850A8MQ14 1090 aa8.53□□□□□ -1.04
CCM2-208ENST00000476594 TRAPPC2LH3BP13 241 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms