RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 BLOC1S5-TXNDC5H3BN57 136 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 LMX1BO60663 402 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 RAMP1O60894 148 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 IGHV4-34P06331 123 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 HOXB5P09067 269 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 OR13C7P0DN81 318 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 HOXA5P20719 270 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 PSMB6P28072 239 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 PRRX1P54821 245 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 SRSF4Q08170 494 aaKnown RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 DPY19L4Q7Z388 723 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 OR13H1Q8NG92 308 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 CD300LFQ8TDQ1 290 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 PTPMT1Q8WUK0 201 aaPredicted RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 TNFRSF14Q92956 283 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 G6PC3Q9BUM1 346 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 IGFLR1Q9H665 355 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 MKKSQ9NPJ1 570 aaPredicted RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 MRPS18BQ9Y676 258 aaKnown RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 BGLAPP02818 100 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 HIST1H1BP16401 226 aaKnown RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 NTSR1P30989 418 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 RPL4P36578 427 aaKnown RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 SLC9A3R2Q15599 337 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 C4orf17Q53FE4 359 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 KHDC3LQ587J8 217 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 ZNF542PQ5EBM4 170 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 IL34Q6ZMJ4 242 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 ZNF550Q7Z398 422 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 LRP11Q86VZ4 500 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 ACBD4Q8NC06 268 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 OR5T1Q8NG75 326 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 ADAMTS17Q8TE56 1095 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 ADAMTS18Q8TE60 1221 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 CCDC107Q8WV48 283 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 SF3B5Q9BWJ5 86 aaKnown RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 OR10A5Q9H207 317 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 SRA1Q9HD15 236 aaKnown RBP7.45□□□□□ -1.22
VAPB-205ENST00000476395 ASCL3Q9NQ33 180 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 HRASLS2Q9NWW9 162 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 SLC22A13Q9Y226 551 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 RFNGQ9Y644 331 aa7.45□□□□□ -1.22
VAPB-205ENST00000476395 MARCH11A6NNE9 402 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 TNFRSF10CO14798 259 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 GMFGO60234 142 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 FABP4P15090 132 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 MDKP21741 143 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 APLNRP35414 380 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 INSM1Q01101 510 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 ITPRIPL2Q3MIP1 535 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 CDNFQ49AH0 187 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 CHRDL2Q6WN34 429 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 TAF8Q7Z7C8 310 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 LYG2Q86SG7 212 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 FAM160A2Q8N612 972 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 ZNF519Q8TB69 540 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 MITD1Q8WV92 249 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 FAM3DQ96BQ1 224 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 CDCA3Q99618 268 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 FAM212BQ9NTI7 297 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 GAR1Q9NY12 217 aaKnown RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 IKZF2Q9UKS7 526 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 SLC5A6Q9Y289 635 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 RCL1Q9Y2P8 373 aaKnown RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 ELOA3DA6NLF2 546 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 ZNF736B4DX44 427 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 CXCL1P09341 107 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 SLC2A1P11166 492 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 CCKBRP32239 447 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 CEBPGP53567 150 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 SLC37A1P57057 533 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 PRPS1P60891 318 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 RPS23P62266 143 aaKnown RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 ZNHIT3Q15649 155 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 ELOA3BQ3SY89 546 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 TMEM184AQ6ZMB5 413 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 HIST2H3AQ71DI3 136 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 MED25Q71SY5 747 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 RNF144BQ7Z419 303 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 PNLDC1Q8NA58 520 aaKnown RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 ELOA3Q8NG57 546 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 OR51A2Q8NGJ7 313 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 MR1Q95460 341 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 CPNE4Q96A23 557 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 RERGQ96A58 199 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 SMIM8Q96KF7 97 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 SYT4Q9H2B2 425 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 FBXO7Q9Y3I1 522 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 HS3ST3B1Q9Y662 390 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 GON4LQ3T8J9 2241 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 KIF26BQ2KJY2 2108 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 IGLV1-36A0A0B4J1U3 117 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 KLF8O95600 359 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 FREM3P0C091 2139 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 S100A2P29034 98 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 CDX1P47902 265 aaPredicted RBP7.44□□□□□ -1.22
VAPB-205ENST00000476395 RAB5CP51148 216 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 CTXN1P60606 82 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 ALG10Q5BKT4 473 aa7.44□□□□□ -1.22
VAPB-205ENST00000476395 ZNF385CQ66K41 422 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms