RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 HMGN2P46Q86SG4 172 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 ARRDC1Q8N5I2 433 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 PPTC7Q8NI37 304 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 CAPSLQ8WWF8 208 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 L3HYPDHQ96EM0 354 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 LZTS2Q9BRK4 669 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 C20orf24Q9BUV8 137 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 FAM192AQ9GZU8 254 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 PSTPIP2Q9H939 334 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 EDA2RQ9HAV5 297 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 GGA2Q9UJY4 613 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 RABL2BQ9UNT1 228 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 MTCH2Q9Y6C9 303 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 PARP14Q460N5 1801 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 MCM3APO60318 1980 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 BAZ2BQ9UIF8 2168 aaKnown RBP2.76□□□□□ -1.97
PTCD3-211ENST00000476215 DENND4AQ7Z401 1863 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 DMDP11532 3685 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 PRRC2BQ5JSZ5 2229 aaKnown RBP2.75□□□□□ -1.97
PTCD3-211ENST00000476215 A0A0U1RQV1 116 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 GSTTP1A0A1W2PQM5 241 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 SMKR1H3BMG3 65 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 NDUFAB1O14561 156 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 ERLIN1O75477 346 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 MPZL1O95297 269 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 RAB3AP20336 220 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 SP4Q02446 784 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 HSDL1Q3SXM5 330 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 UBE2UQ5VVX9 321 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 SAXO2Q658L1 398 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 LRRC66Q68CR7 880 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 SLC25A34Q6PIV7 304 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 TMCO2Q7Z6W1 182 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-211ENST00000476215 CMC1Q7Z7K0 106 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 OR10AD1Q8NGE0 317 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 ZNF721Q8TF20 911 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 TMEM230Q96A57 120 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 FLYWCH2Q96CP2 140 aaKnown RBP2.75□□□□□ -1.97
PTCD3-211ENST00000476215 RNF157Q96PX1 679 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 ZNF2Q9BSG1 426 aaPredicted RBP2.75□□□□□ -1.97
PTCD3-211ENST00000476215 SPZ1Q9BXG8 430 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 CCDC59Q9P031 241 aaKnown RBP2.75□□□□□ -1.97
PTCD3-211ENST00000476215 VANGL2Q9ULK5 521 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 HYOU1Q9Y4L1 999 aa2.75□□□□□ -1.97
PTCD3-211ENST00000476215 DOCK8Q8NF50 2099 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 A0A1B0GW55 424 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 CHST1O43916 411 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 CLDN11O75508 207 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 CCNKO75909 580 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 RCBTB2O95199 551 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 PLEKHA8P1O95397 391 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 H6PDO95479 791 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 ARG1P05089 322 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 SERPINE2P07093 398 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 DUX4L2P0CJ85 424 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 DUX4L3P0CJ86 424 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 DUX4L5P0CJ88 424 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 DUX4L6P0CJ89 424 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 DUX4L7P0CJ90 424 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 SMIM10L2AP0DMW4 78 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 SMIM10L2BP0DMW5 78 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 C1GALT1C1LP0DN25 315 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 ERGP11308 486 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 SLC11A1P49279 550 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 PPP1CBP62140 327 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 DEFB103AP81534 67 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 PSMD5Q16401 504 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 ALKBH6Q3KRA9 238 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 BHLHA15Q7RTS1 189 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-211ENST00000476215 SNX20Q7Z614 316 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 OR4K5Q8NGD3 323 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 NUBPLQ8TB37 319 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 TOP1MTQ969P6 601 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 TGS1Q96RS0 853 aaKnown RBP2.74□□□□□ -1.97
PTCD3-211ENST00000476215 CTRCQ99895 268 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 ING2Q9H160 280 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 ZNF160Q9HCG1 818 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 DUX4Q9UBX2 424 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 UBIAD1Q9Y5Z9 338 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 C5orf42Q9H799 3197 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 LTBP2Q14767 1821 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 SCN10AQ9Y5Y9 1956 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 PIEZO1Q92508 2521 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 BRWD1Q9NSI6 2320 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 TET1Q8NFU7 2136 aa2.74□□□□□ -1.97
PTCD3-211ENST00000476215 NRCAMQ92823 1304 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 TRBV9A0A0B4J1U6 114 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CTAGE15A4D2H0 777 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 BPY2O14599 106 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CDC40O60508 579 aaKnown RBP eCLIP2.73□□□□□ -1.97
PTCD3-211ENST00000476215 EIF4E2O60573 245 aaKnown RBP2.73□□□□□ -1.97
PTCD3-211ENST00000476215 HLA-DQA1P01909 254 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 KRT14P02533 472 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 ZNF806P0C7X5 589 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CT45A6P0DMU7 189 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CT45A5P0DMU8 189 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 CT45A7P0DMV0 189 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 MYL2P10916 166 aa2.73□□□□□ -1.97
PTCD3-211ENST00000476215 U2AF2P26368 475 aaKnown RBP eCLIP2.73□□□□□ -1.971e-10■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms