RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 S100A5P33763 92 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 LCN6P62502 163 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 SCRN3Q0VDG4 424 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 BNIP1Q12981 228 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 GFOD2Q3B7J2 385 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 ACSM6Q6P461 480 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 SLC2A7Q6PXP3 512 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 CFAP77Q6ZQR2 320 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 TCF23Q7RTU1 214 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 GLB1L2Q8IW92 636 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 STPG2Q8N412 459 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 DRAM1Q8N682 238 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 TRIML2Q8N7C3 387 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 FNDC5Q8NAU1 212 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 OR4M1Q8NGD0 313 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 BBS10Q8TAM1 723 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 MYOZ3Q8TDC0 251 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 EPS8L3Q8TE67 593 aaKnown RBP3.67□□□□□ -1.82
USP4-209ENST00000475873 CHPT1Q8WUD6 406 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 ARPC1AQ92747 370 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 DLX4Q92988 240 aaPredicted RBP3.67□□□□□ -1.82
USP4-209ENST00000475873 MAL2Q969L2 176 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 VPS33AQ96AX1 596 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 SLCO4A1Q96BD0 722 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 ELAC2Q9BQ52 826 aaKnown RBP3.67□□□□□ -1.82
USP4-209ENST00000475873 ZNF426Q9BUY5 554 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 FGF23Q9GZV9 251 aaPredicted RBP3.67□□□□□ -1.82
USP4-209ENST00000475873 RNPEPL1Q9HAU8 725 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 TBC1D23Q9NUY8 699 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 NINJ2Q9NZG7 142 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 SELENONQ9NZV5 590 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 GLS2Q9UI32 602 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 ZNF229Q9UJW7 825 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 SNX12Q9UMY4 172 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 PRELID1Q9Y255 219 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 CEPT1Q9Y6K0 416 aa3.67□□□□□ -1.82
USP4-209ENST00000475873 A0A1W2PRG6 482 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 C17orf98A8MV24 154 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 H3BQF6 201 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 J3KRW8 73 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 OVOL1O14753 267 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 POLR3GO15318 223 aaPredicted RBP3.66□□□□□ -1.82
USP4-209ENST00000475873 PSPNO60542 156 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 GMDSO60547 372 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 FMO6PO60774 539 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 TMEM127O75204 238 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 ZNF254O75437 659 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 BAG2O95816 211 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 ACSM4P0C7M7 580 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 ATP6V1B1P15313 513 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 ATF4P18848 351 aaPredicted RBP3.66□□□□□ -1.82
USP4-209ENST00000475873 FUT1P19526 365 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 CDC25BP30305 580 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 DAP3P51398 398 aaKnown RBP3.66□□□□□ -1.82
USP4-209ENST00000475873 CRISP3P54108 245 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 SLURP1P55000 103 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 PLTPP55058 493 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 OR12D2P58182 307 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 DNAJB13P59910 316 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 RPL31P62899 125 aaKnown RBP3.66□□□□□ -1.82
USP4-209ENST00000475873 HIST1H3AP68431 136 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 CFHR3Q02985 330 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 ZNF92Q03936 586 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 LRRC74AQ0VAA2 488 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 TOP3AQ13472 1001 aaPredicted RBP3.66□□□□□ -1.82
USP4-209ENST00000475873 LAPTM4AQ15012 233 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 SNAI3Q3KNW1 292 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 ANKDD1AQ495B1 522 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 GTDC1Q4AE62 458 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 HIST2H3PS2Q5TEC6 136 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 BAIAP2L2Q6UXY1 529 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 HIST2H3AQ71DI3 136 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 NANOGNBQ7Z5D8 188 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 TSEN54Q7Z6J9 526 aaKnown RBP3.66□□□□□ -1.82
USP4-209ENST00000475873 CREG2Q8IUH2 290 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 SGPP2Q8IWX5 399 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 COMMD1Q8N668 190 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 C5orf56Q8N8D9 126 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 TMEM185AQ8NFB2 350 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 OR1M1Q8NGA1 313 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 OR5L1Q8NGL2 311 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 OR4P4Q8NGL7 312 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 OR6Q1Q8NGQ2 317 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 OR2AE1Q8NHA4 323 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 SPRYD4Q8WW59 207 aaPredicted RBP3.66□□□□□ -1.82
USP4-209ENST00000475873 STON2Q8WXE9 905 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 PPP3R2Q96LZ3 170 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 UQCC2Q9BRT2 126 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 ERP44Q9BS26 406 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 OSBPL10Q9BXB5 764 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 FUT8Q9BYC5 575 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 DNTTIP1Q9H147 329 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 TLNRD1Q9H1K6 362 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 RABEP2Q9H5N1 569 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 INIPQ9NRY2 104 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 ARGLU1Q9NWB6 273 aaPredicted RBP3.66□□□□□ -1.82
USP4-209ENST00000475873 NDE1Q9NXR1 346 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 SIGLEC8Q9NYZ4 499 aa3.66□□□□□ -1.82
USP4-209ENST00000475873 LAMP5Q9UJQ1 280 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms