RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 LHFPL3Q86UP9 236 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 CATSPERDQ86XM0 798 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 PLPP7Q8NBV4 271 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 OR51E1Q8TCB6 317 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 ITLN1Q8WWA0 313 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 RORBQ92753 470 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 YIPF5Q969M3 257 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 TIMD4Q96H15 378 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 MEGF10Q96KG7 1140 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 LYZL4Q96KX0 146 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 C4orf36Q96KX1 117 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 ADAT1Q9BUB4 502 aaKnown RBP12.81□□□□□ -0.36
SNX13-207ENST00000475800 ANKRD60Q9BZ19 345 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 BPESC1Q9GZL8 116 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 GPR84Q9NQS5 396 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 ZNF275Q9NSD4 429 aaPredicted RBP12.81□□□□□ -0.36
SNX13-207ENST00000475800 ACOXLQ9NUZ1 547 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 C14orf119Q9NWQ9 140 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 CHCHD3Q9NX63 227 aaKnown RBP12.81□□□□□ -0.36
SNX13-207ENST00000475800 DIMT1Q9UNQ2 313 aaKnown RBP12.81□□□□□ -0.36
SNX13-207ENST00000475800 PPP1R3CQ9UQK1 317 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 MPC1Q9Y5U8 109 aa12.81□□□□□ -0.36
SNX13-207ENST00000475800 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNX13-207ENST00000475800 ANK3Q12955 4377 aaKnown RBP12.8□□□□□ -0.36
SNX13-207ENST00000475800 ANXA2P2A6NMY6 339 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 DHRS7CA6NNS2 312 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 CLDN25C9JDP6 229 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 LYNX1G3V0Z9 82 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 J3QLW9 94 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 CST4P01036 141 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 HLA-DPB1P04440 258 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 HTR1AP08908 422 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 UBCP0CG48 685 aaKnown RBP12.8□□□□□ -0.36
SNX13-207ENST00000475800 LYNX1P0DP58 116 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 ZNF12P17014 697 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 ZNF19P17023 458 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 USF1P22415 310 aaPredicted RBP12.8□□□□□ -0.36
SNX13-207ENST00000475800 MYF6P23409 242 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 OR12D2P58182 307 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 RIPPLY1Q0D2K3 151 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 TMPRSS11AQ6ZMR5 421 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 DOK3Q7L591 496 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 KRT74Q7RTS7 529 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 PEG10Q86TG7 708 aaKnown RBP12.8□□□□□ -0.36
SNX13-207ENST00000475800 SEMA6DQ8NFY4 1073 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 OR8S1Q8NH09 359 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 TMEM80Q96HE8 168 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
SNX13-207ENST00000475800 RAB26Q9ULW5 256 aa12.8□□□□□ -0.36
SNX13-207ENST00000475800 CAB39Q9Y376 341 aaPredicted RBP12.8□□□□□ -0.36
SNX13-207ENST00000475800 ZNF816-ZNF321PA0A0X1KG74 233 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 A0A1B0GVI7 797 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 F5H5P2 479 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 H0YL77 283 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 PPIHO43447 177 aaKnown RBP12.79□□□□□ -0.36
SNX13-207ENST00000475800 CCL1P22362 96 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 CCR9P51686 369 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 ZNF181Q2M3W8 571 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 Q6ZSR3 168 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 C1orf87Q8N0U7 546 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 OR2G2Q8NGZ5 317 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 CCL17Q92583 94 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 GGHQ92820 318 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 HPS1Q92902 700 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 RAB1CQ92928 201 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 PELI1Q96FA3 418 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 FAM71F1Q96KD3 344 aaPredicted RBP12.79□□□□□ -0.36
SNX13-207ENST00000475800 ZNF649Q9BS31 505 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 TMEM106BQ9NUM4 274 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 SCN3BQ9NY72 215 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 PSORS1C1Q9UIG5 152 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 ENPP5Q9UJA9 477 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 SLC22A13Q9Y226 551 aa12.79□□□□□ -0.36
SNX13-207ENST00000475800 A0A096LNT2 108 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 LRRC30A6NM36 301 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 PTBP3O95758 552 aaKnown RBP12.78□□□□□ -0.36
SNX13-207ENST00000475800 LIMS3P0CW19 117 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 LIMS4P0CW20 117 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 ACKR3P25106 362 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 CHN2P52757 468 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 GBX2P52951 348 aaPredicted RBP12.78□□□□□ -0.36
SNX13-207ENST00000475800 ST3GAL4Q11206 333 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 MAB21L1Q13394 359 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 WDR38Q5JTN6 314 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 C6orf141Q5SZD1 244 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 TMEM244Q5VVB8 128 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 STX19Q8N4C7 294 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 KLHL36Q8N4N3 616 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 BPIFB6Q8NFQ5 453 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 OR11L1Q8NGX0 322 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 PPP1R14AQ96A00 147 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 C10orf35Q96D05 121 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 MICU1Q9BPX6 476 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 Q9H521 79 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 GCM1Q9NP62 436 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 RHBDD3Q9Y3P4 386 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 V9GYS6 101 aa12.78□□□□□ -0.36
SNX13-207ENST00000475800 A0A1B0GTI1 187 aa12.77□□□□□ -0.37
SNX13-207ENST00000475800 P2RY10O00398 339 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms