RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 PRRX2Q99811 253 aa15.72■□□□□ 0.11
CCM2-207ENST00000475551 CHST5Q9GZS9 411 aa15.72■□□□□ 0.11
CCM2-207ENST00000475551 C1orf123Q9NWV4 160 aa15.72■□□□□ 0.11
CCM2-207ENST00000475551 ITGA3P26006 1051 aa15.71■□□□□ 0.11
CCM2-207ENST00000475551 GJA4P35212 333 aa15.71■□□□□ 0.11
CCM2-207ENST00000475551 ZNF93P35789 620 aaPredicted RBP15.71■□□□□ 0.11
CCM2-207ENST00000475551 ZNF117Q03924 483 aa15.71■□□□□ 0.11
CCM2-207ENST00000475551 IAH1Q2TAA2 248 aaPredicted RBP15.71■□□□□ 0.11
CCM2-207ENST00000475551 C1orf140Q5VVS0 124 aa15.71■□□□□ 0.11
CCM2-207ENST00000475551 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.71■□□□□ 0.11
CCM2-207ENST00000475551 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.71■□□□□ 0.11
CCM2-207ENST00000475551 WDR92Q96MX6 357 aa15.71■□□□□ 0.11
CCM2-207ENST00000475551 GUCD1Q96NT3 240 aa15.71■□□□□ 0.11
CCM2-207ENST00000475551 SLC35B3Q9H1N7 401 aa15.71■□□□□ 0.11
CCM2-207ENST00000475551 LUZP4Q9P127 313 aa15.71■□□□□ 0.11
CCM2-207ENST00000475551 TUBD1Q9UJT1 453 aa15.71■□□□□ 0.11
CCM2-207ENST00000475551 IFITM10A6NMD0 228 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 SOCS1O15524 211 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 NME2P1O60361 137 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 TTRP02766 147 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 H2BFMP0C1H6 154 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 SUCLG1P53597 346 aaKnown RBP15.71■□□□□ 0.1
CCM2-207ENST00000475551 KIAA0141Q14154 515 aaPredicted RBP15.71■□□□□ 0.1
CCM2-207ENST00000475551 SGK3Q96BR1 496 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 GNRHR2Q96P88 292 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 PLEKHA2Q9HB19 425 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 FAM60AQ9NP50 221 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 KCNJ16Q9NPI9 418 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 UFSP2Q9NUQ7 469 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 FAM206AQ9NX38 181 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 B3GALT5Q9Y2C3 310 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 HDGFL3Q9Y3E1 203 aa15.71■□□□□ 0.1
CCM2-207ENST00000475551 SYT7O43581 403 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 RAD51DO75771 328 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 YIF1AO95070 293 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 LMO1P25800 156 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 SEC13P55735 322 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 TMEM50BP56557 158 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 SURF2Q15527 256 aaPredicted RBP15.7■□□□□ 0.1
CCM2-207ENST00000475551 DEFB110Q30KQ9 67 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 Q3ZCU0 254 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 LINC00346Q8IVM7 164 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 OR13C9Q8NGT0 318 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 S100A13Q99584 98 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 PARP12Q9H0J9 701 aaKnown RBP15.7■□□□□ 0.1
CCM2-207ENST00000475551 PLPP3O14495 311 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 ZNF354AO60765 605 aaPredicted RBP15.7■□□□□ 0.1
CCM2-207ENST00000475551 AMY2BP19961 511 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 RPS23P62266 143 aaKnown RBP15.7■□□□□ 0.1
CCM2-207ENST00000475551 ZNF616Q08AN1 781 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 RPUSD3Q6P087 351 aaKnown RBP15.7■□□□□ 0.1
CCM2-207ENST00000475551 GLIPR1L1Q6UWM5 242 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 ADAMTS18Q8TE60 1221 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 RNF133Q8WVZ7 376 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 SMIM3Q9BZL3 60 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 PARPBPQ9NWS1 579 aa15.7■□□□□ 0.1
CCM2-207ENST00000475551 A8MVM7 634 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 HCRTR2O43614 444 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 CDC14BO60729 498 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 NPIPB7O75200 414 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 OR2C1O95371 312 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 MPIG6BO95866 241 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 S100A2P29034 98 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 GALNSP34059 522 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 OR3A2P47893 321 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 FOXK1P85037 733 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 ZNF383Q8NA42 475 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 TMEM104Q8NE00 496 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 KCNG3Q8TAE7 436 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 CD300LFQ8TDQ1 290 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 GTF3AQ92664 365 aaKnown RBP15.69■□□□□ 0.1
CCM2-207ENST00000475551 C1orf147Q96MC9 270 aaPredicted RBP15.69■□□□□ 0.1
CCM2-207ENST00000475551 PBDC1Q9BVG4 233 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 RTN4RQ9BZR6 473 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 GAR1Q9NY12 217 aaKnown RBP15.69■□□□□ 0.1
CCM2-207ENST00000475551 SUSD2Q9UGT4 822 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 ST8SIA5O15466 376 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 GMFGO60234 142 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 FOSL2P15408 326 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 CAMLGP49069 296 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 ZNF84P51523 738 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 TAS2R46P59540 309 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 PPP1CAP62136 330 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 RAP1AP62834 184 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 FAM189A2Q15884 450 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 DNM1P34Q6PK57 102 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 AKR7LQ8NHP1 331 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 GINS3Q9BRX5 216 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 NXF5Q9H1B4 397 aaKnown RBP15.69■□□□□ 0.1
CCM2-207ENST00000475551 C19orf12Q9NSK7 152 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 CENPMQ9NSP4 180 aa15.69■□□□□ 0.1
CCM2-207ENST00000475551 MRPS28Q9Y2Q9 187 aaKnown RBP15.69■□□□□ 0.1
CCM2-207ENST00000475551 STRAPQ9Y3F4 350 aaKnown RBP15.69■□□□□ 0.1
CCM2-207ENST00000475551 CPAMD8Q8IZJ3 1885 aa15.68■□□□□ 0.1
CCM2-207ENST00000475551 UNC80Q8N2C7 3258 aa15.68■□□□□ 0.1
CCM2-207ENST00000475551 A0A1B0GW64 132 aa15.68■□□□□ 0.1
CCM2-207ENST00000475551 RBMXP38159 391 aaKnown RBP15.68■□□□□ 0.1
CCM2-207ENST00000475551 SLC26A5P58743 744 aa15.68■□□□□ 0.1
CCM2-207ENST00000475551 CLINT1Q14677 625 aa15.68■□□□□ 0.1
CCM2-207ENST00000475551 PRTGQ2VWP7 1150 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms