RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
CCDC78-209ENST00000474647 PYCR1P32322 319 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 TGFBR2P37173 567 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 SPIBQ01892 262 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 GUCA2AQ02747 115 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 IKZF1Q13422 519 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 MICBQ29980 383 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 WDR38Q5JTN6 314 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 TEX36Q5VZQ5 186 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 HIST2H2BDQ6DRA6 164 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 SPATA24Q86W54 205 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 PNKDQ8N490 385 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 SPERTQ8NA61 448 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 PROKR2Q8NFJ6 384 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 H1FXQ92522 213 aaKnown RBP11.5□□□□□ -0.57
CCDC78-209ENST00000474647 PYURFQ96I23 114 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 PPA2Q9H2U2 334 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 MAGIXQ9H6Y5 334 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 KAAG1Q9UBP8 84 aa11.5□□□□□ -0.57
CCDC78-209ENST00000474647 MEIOCA2RUB1 952 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 TVP23AA6NH52 213 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 ANKRD30BLA7E2S9 258 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 RNASEK-C17orf49H0YIS7 233 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 ARPC3O15145 178 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 TBX1O43435 398 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 TSPAN9O75954 239 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 ALX3O95076 343 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 GADD45GO95257 159 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 GRK5P34947 590 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 PRKXP51817 358 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 GMFBP60983 142 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 ACTR3P61158 418 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 CSNK2BP67870 215 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC78-209ENST00000474647 TAF13Q15543 124 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 BEAN1Q3B7T3 259 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 C11orf91Q3C1V1 193 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 FBLN7Q53RD9 439 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 SLC35F1Q5T1Q4 408 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 SLC35E4Q6ICL7 350 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 LYPD4Q6UWN0 246 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 DRAM2Q6UX65 266 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 Q6ZTK2 550 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 SLC36A1Q7Z2H8 476 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 DCXRQ7Z4W1 244 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 ADGRG5Q8IZF4 528 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 C11orf44Q8N8P7 122 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 OR4C15Q8NGM1 316 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 NPRL2Q8WTW4 380 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 KCNG2Q9UJ96 466 aa11.49□□□□□ -0.57
CCDC78-209ENST00000474647 DHRS12A0PJE2 317 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 PIN1P1O15428 100 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 NDUFB3O43676 98 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 LHBP01229 141 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 SPARCP09486 303 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 PSKH1P11801 424 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 MUC1P15941 1255 aaPredicted RBP11.48□□□□□ -0.57
CCDC78-209ENST00000474647 GABRA5P31644 462 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 SAA4P35542 130 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 MAGEA2P43356 314 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 KPNB1Q14974 876 aaKnown RBP11.48□□□□□ -0.57
CCDC78-209ENST00000474647 FAM189A2Q15884 450 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 FAM98BQ52LJ0 330 aaKnown RBP11.48□□□□□ -0.57
CCDC78-209ENST00000474647 METAP1DQ6UB28 335 aaPredicted RBP11.48□□□□□ -0.57
CCDC78-209ENST00000474647 DPY19L4Q7Z388 723 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 WDR86Q86TI4 376 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 GALNT4Q8N4A0 578 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 CYB561A3Q8NBI2 242 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 LY6G5BQ8NDX9 201 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 OR51L1Q8NGJ5 315 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 CANT1Q8WVQ1 401 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 SEH1LQ96EE3 360 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 C7orf34Q96L11 122 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 OPA3Q9H6K4 179 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 CENPMQ9NSP4 180 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 ZNF281Q9Y2X9 895 aa11.48□□□□□ -0.57
CCDC78-209ENST00000474647 XRCC2O43543 280 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 FABP3P05413 133 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 ANXA2P07355 339 aaKnown RBP11.47□□□□□ -0.57
CCDC78-209ENST00000474647 HOXB6P17509 224 aaKnown RBP11.47□□□□□ -0.57
CCDC78-209ENST00000474647 OTX1P32242 354 aaPredicted RBP11.47□□□□□ -0.57
CCDC78-209ENST00000474647 HERPUD1Q15011 391 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 GFOD2Q3B7J2 385 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 LRRC10Q5BKY1 277 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 ZDHHC21Q8IVQ6 265 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 OR1M1Q8NGA1 313 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 OR5T2Q8NGG2 359 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 OR5R1Q8NH85 324 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 DUS3LQ96G46 650 aaKnown RBP11.47□□□□□ -0.57
CCDC78-209ENST00000474647 DHRS1Q96LJ7 313 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 FUZQ9BT04 418 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 TOR3AQ9H497 397 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 RNPEPL1Q9HAU8 725 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 IL1RAPQ9NPH3 570 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 FOXJ3Q9UPW0 622 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 SIGLEC9Q9Y336 463 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 RRP15Q9Y3B9 282 aaKnown RBP11.47□□□□□ -0.57
CCDC78-209ENST00000474647 COMMD3-BMI1R4GMX3 469 aa11.47□□□□□ -0.57
CCDC78-209ENST00000474647 DSCAML1Q8TD84 2053 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms