RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 SEH1LQ96EE3 360 aa15.39■□□□□ 0.05
COL7A1-209ENST00000474432 TBX15Q96SF7 602 aa15.39■□□□□ 0.05
COL7A1-209ENST00000474432 TLNRD1Q9H1K6 362 aa15.39■□□□□ 0.05
COL7A1-209ENST00000474432 MMADHCQ9H3L0 296 aaPredicted RBP15.39■□□□□ 0.05
COL7A1-209ENST00000474432 SP140LQ9H930 580 aa15.39■□□□□ 0.05
COL7A1-209ENST00000474432 RNPEPL1Q9HAU8 725 aa15.39■□□□□ 0.05
COL7A1-209ENST00000474432 DUX4Q9UBX2 424 aa15.39■□□□□ 0.05
COL7A1-209ENST00000474432 IGHV3OR15-7A0A075B7D8 119 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-209ENST00000474432 A6NLC8 198 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 PRR32B1ATL7 298 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 ENSAO43768 121 aaKnown RBP15.38■□□□□ 0.05
COL7A1-209ENST00000474432 E2F6O75461 281 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 SFTPBP07988 381 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 RNASE1P07998 156 aaKnown RBP15.38■□□□□ 0.05
COL7A1-209ENST00000474432 ALOX5APP20292 161 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 CFHR2P36980 270 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 NAA10P41227 235 aaPredicted RBP15.38■□□□□ 0.05
COL7A1-209ENST00000474432 KCNJ8Q15842 424 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 FAHD1Q6P587 224 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 BRD3OSQ6XYD6 125 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 ZNF454Q8N9F8 522 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 THEM6Q8WUY1 208 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 UTP4Q969X6 686 aaKnown RBP15.38■□□□□ 0.05
COL7A1-209ENST00000474432 PGAM5Q96HS1 289 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 TECTBQ96PL2 329 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 CADM1Q9BY67 442 aaKnown RBP15.38■□□□□ 0.05
COL7A1-209ENST00000474432 OR10A2Q9H208 303 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 ERVK-18Q9QC07 812 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 KAAG1Q9UBP8 84 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 MGAM2Q2M2H8 2515 aa15.38■□□□□ 0.05
COL7A1-209ENST00000474432 CCDC182A6NF36 153 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 GSC2O15499 205 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 NDUFA2O43678 99 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 DNAJC8O75937 253 aaPredicted RBP15.37■□□□□ 0.05
COL7A1-209ENST00000474432 CFL1P23528 166 aaKnown RBP15.37■□□□□ 0.05
COL7A1-209ENST00000474432 DAPP51397 102 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 MZT1Q08AG7 82 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 DEFB112Q30KQ8 113 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 GFOD2Q3B7J2 385 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 SLC35D3Q5M8T2 416 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 GALNT4Q8N4A0 578 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 OR8B12Q8NGG6 310 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 OR8S1Q8NH09 359 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 LRRC29Q8WV35 223 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 SIRPDQ9H106 197 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 RGCCQ9H4X1 137 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 ZMAT3Q9HA38 289 aaKnown RBP15.37■□□□□ 0.05
COL7A1-209ENST00000474432 ZNF556Q9HAH1 456 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 TRIM36Q9NQ86 728 aa15.37■□□□□ 0.05
COL7A1-209ENST00000474432 hCG_1807616A0A1W2PRN6 198 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 ZNF879B4DU55 563 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 DVL1O14640 695 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 MTNR1AP48039 350 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 CRISP1P54107 249 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 PSMA6P60900 246 aaKnown RBP15.36■□□□□ 0.05
COL7A1-209ENST00000474432 CD276Q5ZPR3 534 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 RUSC1-AS1Q66K80 236 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 KRT74Q7RTS7 529 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 CSNK2A3Q8NEV1 391 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 NRBF2Q96F24 287 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 LRP12Q9Y561 859 aa15.36■□□□□ 0.05
COL7A1-209ENST00000474432 CENPVL3A0A0U1RRI6 287 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 SRRM5B3KS81 715 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 CDIPTO14735 213 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 TIPRLO75663 272 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 CST4P01036 141 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 LIPFP07098 398 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 EFNB1P98172 346 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 APOFQ13790 326 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 FAM76BQ5HYJ3 339 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 WDR38Q5JTN6 314 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.35■□□□□ 0.05
COL7A1-209ENST00000474432 HPSE2Q8WWQ2 592 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 OR5P3Q8WZ94 311 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 WDFY2Q96P53 400 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 TEAD3Q99594 435 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 CCL13Q99616 98 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 PCGF1Q9BSM1 259 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 ZNF747Q9BV97 191 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 PAPOLGQ9BWT3 736 aaKnown RBP15.35■□□□□ 0.05
COL7A1-209ENST00000474432 YY1AP1Q9H869 796 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 TVP23BQ9NYZ1 205 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 PCDHGB1Q9Y5G3 927 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 PKD1L1Q8TDX9 2849 aa15.35■□□□□ 0.05
COL7A1-209ENST00000474432 ZNF850A8MQ14 1090 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 MUC1P15941 1255 aaPredicted RBP15.34■□□□□ 0.05
COL7A1-209ENST00000474432 DCTDP32321 178 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 FOXL1Q12952 345 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 BNIP1Q12981 228 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 PRDX4Q13162 271 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 PTGES3Q15185 160 aaKnown RBP15.34■□□□□ 0.05
COL7A1-209ENST00000474432 BTN2A1Q7KYR7 527 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 YIPF3Q9GZM5 350 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 WDR13Q9H1Z4 485 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 PAPOLBQ9NRJ5 636 aaKnown RBP15.34■□□□□ 0.05
COL7A1-209ENST00000474432 FAM206AQ9NX38 181 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 COPS3Q9UNS2 423 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 MPC1Q9Y5U8 109 aa15.34■□□□□ 0.05
COL7A1-209ENST00000474432 PSMD9O00233 223 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms