RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ARMCX4Q5H9R4 360 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 AADACL4Q5VUY2 407 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 NXNL2Q5VZ03 156 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 WDR25Q64LD2 544 aaPredicted RBP9.33□□□□□ -0.92
CKS1B-206ENST00000474215 SFRP4Q6FHJ7 346 aaPredicted RBP9.33□□□□□ -0.92
CKS1B-206ENST00000474215 BTNL3Q6UXE8 466 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 ZNF841Q6ZN19 808 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 BCDIN3DQ7Z5W3 292 aaKnown RBP9.33□□□□□ -0.92
CKS1B-206ENST00000474215 WDR86Q86TI4 376 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 C11orf53Q8IXP5 236 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 ZNF679Q8IYX0 411 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 GALNT4Q8N4A0 578 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 BPIFB2Q8N4F0 458 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 GCSAMQ8N6F7 178 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 SEMA6DQ8NFY4 1073 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 OR1M1Q8NGA1 313 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 OR8B12Q8NGG6 310 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 ZFAND2BQ8WV99 257 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 LYZL4Q96KX0 146 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 IL4I1Q96RQ9 567 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 CNN2Q99439 309 aaKnown RBP9.33□□□□□ -0.92
CKS1B-206ENST00000474215 CIB1Q99828 191 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 PAPOLGQ9BWT3 736 aaKnown RBP9.33□□□□□ -0.92
CKS1B-206ENST00000474215 SUCNR1Q9BXA5 334 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 SEMA6AQ9H2E6 1030 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 PPP1R3EQ9H7J1 279 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 RNPEPL1Q9HAU8 725 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 OAZ3Q9UMX2 235 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 MPC1Q9Y5U8 109 aa9.33□□□□□ -0.92
CKS1B-206ENST00000474215 IGHV2-70DA0A0C4DH43 119 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 A0A0U1RQV5 110 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 hCG_1807616A0A1W2PRN6 198 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 OOEPA6NGQ2 149 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 SLC22A31A6NKX4 558 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 ANXA2P2A6NMY6 339 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 PSMD9O00233 223 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 PHYHO14832 338 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 PPIAL4GP0DN37 164 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 ACKR3P25106 362 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 POLR2IP36954 125 aaKnown RBP9.32□□□□□ -0.92
CKS1B-206ENST00000474215 NPY4RP50391 375 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 HILS1P60008 231 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 PRDX4Q13162 271 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 KLF17Q5JT82 389 aaPredicted RBP9.32□□□□□ -0.92
CKS1B-206ENST00000474215 CCDC121Q6ZUS5 278 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 PYDC1Q8WXC3 89 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 C22orf15Q8WYQ4 148 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 OR5P3Q8WZ94 311 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 ITFG2Q969R8 447 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 DACT3Q96B18 629 aaPredicted RBP9.32□□□□□ -0.92
CKS1B-206ENST00000474215 ITPKCQ96DU7 683 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 OR8B4Q96RC9 309 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 JMJD8Q96S16 334 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 MNTQ99583 582 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 SLC6A7Q99884 636 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 MICU1Q9BPX6 476 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 RTL8AQ9BWD3 113 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 OSBPL10Q9BXB5 764 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 ABCB9Q9NP78 766 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 FAM206AQ9NX38 181 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 HAO2Q9NYQ3 351 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 ERVK-18Q9QC07 812 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 IKZF2Q9UKS7 526 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 NUP50Q9UKX7 468 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 COPS3Q9UNS2 423 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 ARHGAP32A7KAX9 2087 aa9.32□□□□□ -0.92
CKS1B-206ENST00000474215 SAC3D1A6NKF1 404 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 ZNF850A8MQ14 1090 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 PRR32B1ATL7 298 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 CDIPTO14735 213 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 ADAM20O43506 726 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 MUC1P15941 1255 aaPredicted RBP9.31□□□□□ -0.92
CKS1B-206ENST00000474215 CFHR2P36980 270 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 MAP2K3P46734 347 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 RIDAP52758 137 aaKnown RBP9.31□□□□□ -0.92
CKS1B-206ENST00000474215 CXCR4P61073 352 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 ACTR3P61158 418 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 CSNK2BP67870 215 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 TEX36Q5VZQ5 186 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 CD276Q5ZPR3 534 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 ZNF322Q6U7Q0 402 aaPredicted RBP9.31□□□□□ -0.92
CKS1B-206ENST00000474215 WDR82Q6UXN9 313 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 KRT74Q7RTS7 529 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 FAM90A1Q86YD7 464 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 GID4Q8IVV7 300 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 SLC35F2Q8IXU6 374 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 FAM81AQ8TBF8 368 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 LRRC29Q8WV35 223 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 PIGCQ92535 297 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 RNF170Q96K19 258 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 HIST1H2AAQ96QV6 131 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 PKP2Q99959 881 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 APOL4Q9BPW4 351 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 RBM4BQ9BQ04 359 aaKnown RBP9.31□□□□□ -0.92
CKS1B-206ENST00000474215 NUDT16L1Q9BRJ7 211 aaKnown RBP9.31□□□□□ -0.92
CKS1B-206ENST00000474215 GABARAPL3Q9BY60 117 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 PBOV1Q9GZY1 135 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 TLNRD1Q9H1K6 362 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 ADGRL4Q9HBW9 690 aa9.31□□□□□ -0.92
CKS1B-206ENST00000474215 CLN6Q9NWW5 311 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms