RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SRSF3P84103 164 aaKnown RBP9.66□□□□□ -0.86
C9orf3-214ENST00000473778 GFOD2Q3B7J2 385 aa9.66□□□□□ -0.86
C9orf3-214ENST00000473778 Q3ZCU0 254 aa9.66□□□□□ -0.86
C9orf3-214ENST00000473778 TMEM185AQ8NFB2 350 aa9.66□□□□□ -0.86
C9orf3-214ENST00000473778 CADM4Q8NFZ8 388 aa9.66□□□□□ -0.86
C9orf3-214ENST00000473778 OR5D18Q8NGL1 313 aa9.66□□□□□ -0.86
C9orf3-214ENST00000473778 SGK3Q96BR1 496 aa9.66□□□□□ -0.86
C9orf3-214ENST00000473778 FAM71F1Q96KD3 344 aaPredicted RBP9.66□□□□□ -0.86
C9orf3-214ENST00000473778 FBLN5Q9UBX5 448 aa9.66□□□□□ -0.86
C9orf3-214ENST00000473778 CSAG2Q9Y5P2 127 aa9.66□□□□□ -0.86
C9orf3-214ENST00000473778 GDF9O60383 454 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 CDC14BO60729 498 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 HFEQ30201 348 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 NKAIN1Q4KMZ8 207 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 COMMD2Q86X83 199 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 ZSCAN4Q8NAM6 433 aaPredicted RBP9.65□□□□□ -0.86
C9orf3-214ENST00000473778 NOXO1Q8NFA2 376 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 NUBPLQ8TB37 319 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 SSC4DQ8WTU2 575 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 ZNF775Q96BV0 537 aaPredicted RBP9.65□□□□□ -0.86
C9orf3-214ENST00000473778 ARHGAP5-AS1Q96IT6 56 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 ADAT1Q9BUB4 502 aaKnown RBP9.65□□□□□ -0.86
C9orf3-214ENST00000473778 LHX6Q9UPM6 363 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 MRPS28Q9Y2Q9 187 aaKnown RBP9.65□□□□□ -0.86
C9orf3-214ENST00000473778 B3GALT1Q9Y5Z6 326 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 PI4KAP42356 2102 aa9.65□□□□□ -0.86
C9orf3-214ENST00000473778 RAB19A4D1S5 217 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 C5orf51A6NDU8 294 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 ZNF878C9JN71 531 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 F5H0A9 414 aaPredicted RBP9.65□□□□□ -0.87
C9orf3-214ENST00000473778 ACTL6AO96019 429 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 HEXBP07686 556 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 SFTPDP35247 375 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 SUMO3P55854 103 aaPredicted RBP9.65□□□□□ -0.87
C9orf3-214ENST00000473778 CLRN1P58418 232 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 MC2RQ01718 297 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 SHBQ15464 509 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 THEM4Q5T1C6 240 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 FAHD2BQ6P2I3 314 aaPredicted RBP9.65□□□□□ -0.87
C9orf3-214ENST00000473778 WDR74Q6RFH5 385 aaPredicted RBP9.65□□□□□ -0.87
C9orf3-214ENST00000473778 CARFQ8N187 725 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 DTWD2Q8NBA8 298 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 MAFIPQ8WZ33 124 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 PIK3IP1Q96FE7 263 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 FAHD2AQ96GK7 314 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 LIN37Q96GY3 246 aaPredicted RBP9.65□□□□□ -0.87
C9orf3-214ENST00000473778 TMEM41AQ96HV5 264 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 ZNF251Q9BRH9 671 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 ZNF576Q9H609 170 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 CHMP1AQ9HD42 196 aaPredicted RBP9.65□□□□□ -0.87
C9orf3-214ENST00000473778 CYTL1Q9NRR1 136 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 PPP4R1LQ9P1A2 415 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 ANAPC10Q9UM13 185 aa9.65□□□□□ -0.87
C9orf3-214ENST00000473778 GPR31O00270 319 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 ST8SIA5O15466 376 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 EIF3GO75821 320 aaKnown RBP eCLIP9.64□□□□□ -0.87
C9orf3-214ENST00000473778 HIST1H1DP16402 221 aaKnown RBP9.64□□□□□ -0.87
C9orf3-214ENST00000473778 PSMB6P28072 239 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 SLC9A3R2Q15599 337 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 ANKRD55Q3KP44 614 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 SLC25A53Q5H9E4 307 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 SLC25A47Q6Q0C1 308 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 UEVLDQ8IX04 471 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 WDSUB1Q8N9V3 476 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 TERB2Q8NHR7 220 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 THAP6Q8TBB0 222 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 ELP5Q8TE02 316 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 NPRL2Q8WTW4 380 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 RAB3CQ96E17 227 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 LYZL4Q96KX0 146 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 MRGPRX4Q96LA9 322 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 OR5B2Q96R09 309 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 OR6C1Q96RD1 312 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 RTBDNQ9BSG5 229 aaPredicted RBP9.64□□□□□ -0.87
C9orf3-214ENST00000473778 MYOTQ9UBF9 498 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 GPR132Q9UNW8 380 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 POLR1DQ9Y2S0 133 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 WIF1Q9Y5W5 379 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 SDCBPO00560 298 aaPredicted RBP9.64□□□□□ -0.87
C9orf3-214ENST00000473778 MFNGO00587 321 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 EIF1BO60739 113 aaKnown RBP9.64□□□□□ -0.87
C9orf3-214ENST00000473778 IFNA6P05013 189 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 ZNF20P17024 532 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 EIF1P41567 113 aaKnown RBP9.64□□□□□ -0.87
C9orf3-214ENST00000473778 CX3CR1P49238 355 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 ZNF41P51814 821 aaPredicted RBP9.64□□□□□ -0.87
C9orf3-214ENST00000473778 GABREP78334 506 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 GUCA2BQ16661 112 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 ZNF528Q3MIS6 628 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 PHYHD1Q5SRE7 291 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 AADACL3Q5VUY0 350 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 CLEC18BQ6UXF7 455 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 FAM57BQ71RH2 274 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 OR4K17Q8NGC6 315 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 SFT2D1Q8WV19 159 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 TCEAL3Q969E4 200 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 PHYHIPLQ96FC7 376 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 NARS2Q96I59 477 aaKnown RBP9.64□□□□□ -0.87
C9orf3-214ENST00000473778 ASF1BQ9NVP2 202 aa9.64□□□□□ -0.87
C9orf3-214ENST00000473778 OR5AC2Q9NZP5 309 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms