RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 KCNN3Q9UGI6 736 aa11.1□□□□□ -0.63
VPS13D-205ENST00000473099 SLC25A15Q9Y619 301 aa11.1□□□□□ -0.63
VPS13D-205ENST00000473099 V9GYH0 126 aa11.1□□□□□ -0.63
VPS13D-205ENST00000473099 DIDO1Q9BTC0 2240 aaKnown RBP11.1□□□□□ -0.63
VPS13D-205ENST00000473099 LOC100289279A0A1B0GTE1 492 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 C5orf63A6NC05 138 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 PAHP00439 452 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 PRB1P04280 392 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 HCKP08631 526 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 UBBP0CG47 229 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 FAHP16930 419 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 ELK1P19419 428 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 ANOS1P23352 680 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 ZNF93P35789 620 aaPredicted RBP11.09□□□□□ -0.63
VPS13D-205ENST00000473099 ART1P52961 327 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 TSC22D1Q15714 1073 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 FAM189A2Q15884 450 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 TMEM42Q69YG0 159 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 KRT74Q7RTS7 529 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 OR5AS1Q8N127 324 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 PIGTQ969N2 578 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 PTX4Q96A99 478 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 FAM3DQ96BQ1 224 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 MS4A3Q96HJ5 214 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 SOSTQ9BQB4 213 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 SOX7Q9BT81 388 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 BCL2L14Q9BZR8 327 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 EXTL2Q9UBQ6 330 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 GHRLQ9UBU3 117 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 OR5V1Q9UGF6 321 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 SH3BGRL2Q9UJC5 107 aa11.09□□□□□ -0.63
VPS13D-205ENST00000473099 ISPDA4D126 451 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 GGT3PA6NGU5 568 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 J3QRK9 145 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 UPK1BO75841 260 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 BPNT1O95861 308 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 EIF4EP06730 217 aaKnown RBP11.08□□□□□ -0.64
VPS13D-205ENST00000473099 CCL2P13500 99 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 PPP3CBP16298 524 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 SELEP16581 610 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 WNT5AP41221 380 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 RAD52P43351 418 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 PITPNAQ00169 270 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 GK2Q14410 553 aaPredicted RBP11.08□□□□□ -0.64
VPS13D-205ENST00000473099 PPA1Q15181 289 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 PYHIN1Q6K0P9 492 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 FBXW12Q6X9E4 464 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 LHFPL2Q6ZUX7 228 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 LYPD6Q86Y78 171 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 RELL2Q8NC24 303 aaPredicted RBP11.08□□□□□ -0.64
VPS13D-205ENST00000473099 OR52N4Q8NGI2 321 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 OR5H6Q8NGV6 325 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 SSC4DQ8WTU2 575 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 S100PBPQ96BU1 408 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 S100A16Q96FQ6 103 aaKnown RBP11.08□□□□□ -0.64
VPS13D-205ENST00000473099 LRRC46Q96FV0 321 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 GPER1Q99527 375 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 RHBDL2Q9NX52 303 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 SLC7A11Q9UPY5 501 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 STARD10Q9Y365 291 aa11.08□□□□□ -0.64
VPS13D-205ENST00000473099 HELZ2Q9BYK8 2649 aaKnown RBP11.07□□□□□ -0.64
VPS13D-205ENST00000473099 A0A0A6YYH2 397 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 A0A1W2PR80 420 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 A6NIN4 97 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 A6NJ64 397 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 C16orf97H3BN30 126 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 SMPD2O60906 423 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 SCGNO76038 276 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 NRASP01111 189 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 ARSBP15848 533 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 RAB6AP20340 208 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 ACKR3P25106 362 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 AZGP1P25311 298 aaKnown RBP11.07□□□□□ -0.64
VPS13D-205ENST00000473099 ALDH3B1P43353 468 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 PITPNBP48739 271 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 POU3F4P49335 361 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 ASCL1P50553 236 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 FUT6P51993 359 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 PPP1CBP62140 327 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 IL18Q14116 193 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 MTFR2Q6P444 385 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 PCSK4Q6UW60 755 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 OR51D1Q8NGF3 324 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 SYNPRQ8TBG9 265 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 SLC25A28Q96A46 364 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 HAVCR1Q96D42 359 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 ACTR6Q9GZN1 396 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 SRRQ9GZT4 340 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 PTTG3PQ9NZH4 202 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 FBLN5Q9UBX5 448 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 CGGBP1Q9UFW8 167 aaPredicted RBP11.07□□□□□ -0.64
VPS13D-205ENST00000473099 SPEF1Q9Y4P9 236 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 HCFC1P51610 2035 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 TENM4Q6N022 2769 aa11.07□□□□□ -0.64
VPS13D-205ENST00000473099 A0A0B4J203 849 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 IGKV1-9A0A0C4DH69 117 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 CCL21O00585 134 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 GMDSO60547 372 aa11.06□□□□□ -0.64
VPS13D-205ENST00000473099 CST4P01036 141 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms