RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 LIPAP38571 399 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 PMELP40967 661 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 MRPS11P82912 194 aaKnown RBP11.08□□□□□ -0.64
TPM3-216ENST00000473036 TNFAIP6P98066 277 aaPredicted RBP11.08□□□□□ -0.64
TPM3-216ENST00000473036 LOXL1Q08397 574 aaPredicted RBP11.08□□□□□ -0.64
TPM3-216ENST00000473036 MALLQ13021 153 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 MAB21L1Q13394 359 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 GALEQ14376 348 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 ZNF773Q6PK81 442 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 AHSA2Q719I0 299 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 MRPL21Q7Z2W9 205 aaKnown RBP11.08□□□□□ -0.64
TPM3-216ENST00000473036 SYS1Q8N2H4 156 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 OR10H4Q8NGA5 316 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 OR56B2PQ8NGI1 322 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 OR52I1Q8NGK6 324 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 PGAM5Q96HS1 289 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 OR2V2Q96R30 315 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 PIMREGQ9BSJ6 248 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 MND1Q9BWT6 205 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 CCDC90BQ9GZT6 254 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 FGF23Q9GZV9 251 aaPredicted RBP11.08□□□□□ -0.64
TPM3-216ENST00000473036 CHODLQ9H9P2 273 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 SAP30LQ9HAJ7 183 aa11.08□□□□□ -0.64
TPM3-216ENST00000473036 MYOZ1Q9NP98 299 aaPredicted RBP11.08□□□□□ -0.64
TPM3-216ENST00000473036 CGGBP1Q9UFW8 167 aaPredicted RBP11.08□□□□□ -0.64
TPM3-216ENST00000473036 CAB39Q9Y376 341 aaPredicted RBP11.08□□□□□ -0.64
TPM3-216ENST00000473036 ARHGAP32A7KAX9 2087 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 IGHV1-69-2A0A0G2JMI3 117 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 TMEM269A0A1B0GVZ9 245 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 MYL12BO14950 172 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 XRCC2O43543 280 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 KRT8P05787 483 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 ERCC1P07992 297 aaPredicted RBP11.07□□□□□ -0.64
TPM3-216ENST00000473036 CA6P23280 308 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 THBS2P35442 1172 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 GSK3AP49840 483 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 OR8B8Q15620 311 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 TIGD6Q17RP2 521 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 GFOD2Q3B7J2 385 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 FAM220AQ7Z4H9 259 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 KLHL36Q8N4N3 616 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 OR52H1Q8NGJ2 320 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 OR13G1Q8NGZ3 307 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 OR52N1Q8NH53 320 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 RORBQ92753 470 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 ITFG2Q969R8 447 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 MEGF10Q96KG7 1140 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 SIGLEC11Q96RL6 698 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 PBOV1Q9GZY1 135 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 GCM1Q9NP62 436 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 DECR2Q9NUI1 292 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 TMEM100Q9NV29 134 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 IL19Q9UHD0 177 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 IKZF2Q9UKS7 526 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 ANK2Q01484 3957 aa11.07□□□□□ -0.64
TPM3-216ENST00000473036 LOC100289279A0A1B0GTE1 492 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 A0A1B0GTI1 187 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 GGT3PA6NGU5 568 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 ACOD1A6NK06 481 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 TTRP02766 147 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 MT-ND5P03915 603 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 USF1P22415 310 aaPredicted RBP11.06□□□□□ -0.64
TPM3-216ENST00000473036 MMP16P51512 607 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 RIDAP52758 137 aaKnown RBP11.06□□□□□ -0.64
TPM3-216ENST00000473036 TAS2R43P59537 309 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 TMEM249Q2WGJ8 235 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 CHRFAM7AQ494W8 412 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 TP53I3Q53FA7 332 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 AVPI1Q5T686 147 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 LIPNQ5VXI9 398 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 WDR86Q86TI4 376 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 PRSS35Q8N3Z0 413 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 ZNF420Q8TAQ5 688 aaPredicted RBP11.06□□□□□ -0.64
TPM3-216ENST00000473036 SPRYD4Q8WW59 207 aaPredicted RBP11.06□□□□□ -0.64
TPM3-216ENST00000473036 OR10A2Q9H208 303 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 ERVK13-1Q9NX77 482 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 SCOCQ9UIL1 159 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 CDC42EP3Q9UKI2 254 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 SLC22A13Q9Y226 551 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 RHBDD3Q9Y3P4 386 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 R4GMQ9 66 aa11.06□□□□□ -0.64
TPM3-216ENST00000473036 A0A0U1RQV5 110 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 METTL15A6NJ78 407 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 TPD52L2O43399 206 aaKnown RBP11.05□□□□□ -0.64
TPM3-216ENST00000473036 PPIHO43447 177 aaKnown RBP11.05□□□□□ -0.64
TPM3-216ENST00000473036 RPP14O95059 124 aaKnown RBP11.05□□□□□ -0.64
TPM3-216ENST00000473036 FAM157CP0CG43 387 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 IGHV4-31P0DP07 118 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 PSMB10P40306 273 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 GBX2P52951 348 aaPredicted RBP11.05□□□□□ -0.64
TPM3-216ENST00000473036 TMEM33P57088 247 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 OR12D2P58182 307 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 BDH1Q02338 343 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 MPPED2Q15777 294 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 TBCEQ15813 527 aaPredicted RBP11.05□□□□□ -0.64
TPM3-216ENST00000473036 CDONQ4KMG0 1287 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 CCDC58Q4VC31 144 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 ZMAT1Q5H9K5 638 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 PRAMEF6Q5VXH4 476 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 CATSPERDQ86XM0 798 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms