RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CLPTM1LQ96KA5 538 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 ABHD6Q9BV23 337 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 PAPOLGQ9BWT3 736 aaKnown RBP16.34■□□□□ 0.21
COL9A3-210ENST00000472880 C1RLQ9NZP8 487 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 DNAJC27Q9NZQ0 273 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 KAAG1Q9UBP8 84 aa16.34■□□□□ 0.21
COL9A3-210ENST00000472880 hCG_38984A0A1B0GV85 526 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 NDUFA7O95182 113 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 MUC1P15941 1255 aaPredicted RBP16.33■□□□□ 0.2
COL9A3-210ENST00000472880 GSTT1P30711 240 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 ZNF121P58317 390 aaPredicted RBP16.33■□□□□ 0.2
COL9A3-210ENST00000472880 CSNK2BP67870 215 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 WDR86Q86TI4 376 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 FTMTQ8N4E7 242 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 KIR3DL3Q8N743 410 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 OR10G2Q8NGC3 310 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 RNF133Q8WVZ7 376 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 SGK3Q96BR1 496 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 CCDC124Q96CT7 223 aaKnown RBP16.33■□□□□ 0.2
COL9A3-210ENST00000472880 THTPAQ9BU02 230 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 OR10A2Q9H208 303 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 MED20Q9H944 212 aa16.33■□□□□ 0.2
COL9A3-210ENST00000472880 RPUSD1Q9UJJ7 312 aaKnown RBP16.33■□□□□ 0.2
COL9A3-210ENST00000472880 PKD1L1Q8TDX9 2849 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 FAM183AA6NL82 134 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 H3BN98 237 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 FCN3O75636 299 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 PAICSP22234 425 aaKnown RBP16.32■□□□□ 0.2
COL9A3-210ENST00000472880 NAA10P41227 235 aaPredicted RBP16.32■□□□□ 0.2
COL9A3-210ENST00000472880 GSK3AP49840 483 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 RPL15P61313 204 aaKnown RBP16.32■□□□□ 0.2
COL9A3-210ENST00000472880 SNCBQ16143 134 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 WDR38Q5JTN6 314 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 OLFML2AQ68BL7 652 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 WDR82Q6UXN9 313 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 SHFQ7M4L6 423 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 SLC36A1Q7Z2H8 476 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 IQCF1Q8N6M8 205 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 CSNK2A3Q8NEV1 391 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 PGAM5Q96HS1 289 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 CCL13Q99616 98 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 NIPSNAP1Q9BPW8 284 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 BRD7Q9NPI1 651 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 ONECUT1Q9UBC0 465 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 KPTNQ9Y664 436 aa16.32■□□□□ 0.2
COL9A3-210ENST00000472880 A0A1B0GVI7 797 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 ANXA2P2A6NMY6 339 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 H2BFMP0C1H6 154 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 RELBQ01201 579 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 CDONQ4KMG0 1287 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 DNAL1Q4LDG9 190 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 BRICD5Q6PL45 260 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 PRSS45Q7RTY3 260 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 VMO1Q7Z5L0 202 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 C11orf53Q8IXP5 236 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 DYRK2Q92630 601 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 MICU1Q9BPX6 476 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 RGCCQ9H4X1 137 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 CNTD2Q9H8S5 307 aa16.31■□□□□ 0.2
COL9A3-210ENST00000472880 A0A0U1RQK1 487 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 A0A1B0GW55 424 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 CLPSL1A2RUU4 121 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 ACOT8O14734 319 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 GYG2O15488 501 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 GLCEO94923 617 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 DUX4L2P0CJ85 424 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 DUX4L3P0CJ86 424 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 DUX4L4P0CJ87 422 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 DUX4L5P0CJ88 424 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 DUX4L6P0CJ89 424 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 DUX4L7P0CJ90 424 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 OPRL1P41146 370 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 IL5RAQ01344 420 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 GK3PQ14409 553 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 KLHL12Q53G59 568 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 DUX4L9Q6RFH8 374 aaPredicted RBP16.3■□□□□ 0.2
COL9A3-210ENST00000472880 CD300LDQ6UXZ3 194 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 RHOUQ7L0Q8 258 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 LDLRAD3Q86YD5 345 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.3■□□□□ 0.2
COL9A3-210ENST00000472880 PDZD9Q8IXQ8 264 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 CMTM4Q8IZR5 234 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 FGFRL1Q8N441 504 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 FAM216BQ8N7L0 139 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 C12orf43Q96C57 262 aaKnown RBP16.3■□□□□ 0.2
COL9A3-210ENST00000472880 SLC7A6OSQ96CW6 309 aaPredicted RBP16.3■□□□□ 0.2
COL9A3-210ENST00000472880 LRGUKQ96M69 825 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 AMELYQ99218 206 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 RTL8AQ9BWD3 113 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 OR51V1Q9H2C8 321 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 DUX4Q9UBX2 424 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 RHBDD3Q9Y3P4 386 aa16.3■□□□□ 0.2
COL9A3-210ENST00000472880 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.29■□□□□ 0.2
COL9A3-210ENST00000472880 CDIPTO14735 213 aa16.29■□□□□ 0.2
COL9A3-210ENST00000472880 NDUFB3O43676 98 aa16.29■□□□□ 0.2
COL9A3-210ENST00000472880 GPR137BO60478 399 aa16.29■□□□□ 0.2
COL9A3-210ENST00000472880 IGHV4-59P01825 116 aa16.29■□□□□ 0.2
COL9A3-210ENST00000472880 LYNP07948 512 aa16.29■□□□□ 0.2
COL9A3-210ENST00000472880 RAP2AP10114 183 aa16.29■□□□□ 0.2
COL9A3-210ENST00000472880 ELF3P78545 371 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms