RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 GNALP38405 381 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 GINS1Q14691 196 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 MICBQ29980 383 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 KLHL12Q53G59 568 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 Q6YL49 198 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 TMEM179BQ7Z7N9 219 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 PGAM5Q96HS1 289 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 PAPOLGQ9BWT3 736 aaKnown RBP18.66■□□□□ 0.58
C9orf3-213ENST00000471978 PPP1R3EQ9H7J1 279 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 ZNF696Q9H7X3 374 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 TAS2R1Q9NYW7 299 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 PDP1Q9P0J1 537 aaPredicted RBP18.66■□□□□ 0.58
C9orf3-213ENST00000471978 KAAG1Q9UBP8 84 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 RHBDD3Q9Y3P4 386 aa18.66■□□□□ 0.58
C9orf3-213ENST00000471978 PRR23D1E9PI22 279 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-213ENST00000471978 TIPRLO75663 272 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 ECDO95905 644 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-213ENST00000471978 PRR23D2P0DMB1 279 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-213ENST00000471978 MDKP21741 143 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-213ENST00000471978 OMGP23515 440 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 CSNK2BP67870 215 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 C11orf91Q3C1V1 193 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 PLBD1Q6P4A8 553 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 WDR82Q6UXN9 313 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-213ENST00000471978 CSNK2A3Q8NEV1 391 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 THEM6Q8WUY1 208 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 CANT1Q8WVQ1 401 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 GATAD2BQ8WXI9 593 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 ST8SIA4Q92187 359 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 THTPAQ9BU02 230 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 SIRPDQ9H106 197 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 C1orf21Q9H246 121 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 RGCCQ9H4X1 137 aa18.65■□□□□ 0.58
C9orf3-213ENST00000471978 FAM181BA6NEQ2 426 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 SELENOFO60613 162 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 LYNP07948 512 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 MUC1P15941 1255 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-213ENST00000471978 NAA10P41227 235 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-213ENST00000471978 ARF6P62330 175 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 PDCD1Q15116 288 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 SNCBQ16143 134 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 FTMTQ8N4E7 242 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 ZNF454Q8N9F8 522 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 OTOSQ8NHW6 89 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 LHX4Q969G2 390 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 FAM71F1Q96KD3 344 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-213ENST00000471978 CCL13Q99616 98 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 MICU1Q9BPX6 476 aa18.64■□□□□ 0.57
C9orf3-213ENST00000471978 AQP12BA6NM10 295 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 CDIPTO14735 213 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 HMGN1P05114 100 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 ELF3P78545 371 aaPredicted RBP18.63■□□□□ 0.57
C9orf3-213ENST00000471978 IL5RAQ01344 420 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 WDR38Q5JTN6 314 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 AQP12AQ8IXF9 295 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 GALNT4Q8N4A0 578 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 ITPKCQ96DU7 683 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 ZNF556Q9HAH1 456 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 ACOXLQ9NUZ1 547 aa18.63■□□□□ 0.57
C9orf3-213ENST00000471978 RPUSD1Q9UJJ7 312 aaKnown RBP18.63■□□□□ 0.57
C9orf3-213ENST00000471978 IGHV1-69DA0A0B4J2H0 117 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 A0A1B0GW55 424 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 ANXA2P2A6NMY6 339 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-213ENST00000471978 E2F6O75461 281 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 IGHV1-69P01742 117 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 CRYBA1P05813 215 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 MELTFP08582 738 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 DUX4L2P0CJ85 424 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 DUX4L3P0CJ86 424 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 DUX4L4P0CJ87 422 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 DUX4L5P0CJ88 424 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 DUX4L6P0CJ89 424 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 DUX4L7P0CJ90 424 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 OSMP13725 252 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 DUX4L9Q6RFH8 374 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-213ENST00000471978 FIP1L1Q6UN15 594 aaKnown RBP18.62■□□□□ 0.57
C9orf3-213ENST00000471978 SLC36A1Q7Z2H8 476 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 CPOQ8IVL8 374 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 HS3ST5Q8IZT8 346 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 FGFRL1Q8N441 504 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 TMEM86BQ8N661 226 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 SEH1LQ96EE3 360 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 SLITRK2Q9H156 845 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 TLNRD1Q9H1K6 362 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 CNTD2Q9H8S5 307 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 DUX4Q9UBX2 424 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 MPC1Q9Y5U8 109 aa18.62■□□□□ 0.57
C9orf3-213ENST00000471978 PRODHO43272 600 aa18.61■□□□□ 0.57
C9orf3-213ENST00000471978 HOXB6P17509 224 aaKnown RBP18.61■□□□□ 0.57
C9orf3-213ENST00000471978 ACKR3P25106 362 aa18.61■□□□□ 0.57
C9orf3-213ENST00000471978 CDK5Q00535 292 aa18.61■□□□□ 0.57
C9orf3-213ENST00000471978 FAM216BQ8N7L0 139 aa18.61■□□□□ 0.57
C9orf3-213ENST00000471978 C12orf43Q96C57 262 aaKnown RBP18.61■□□□□ 0.57
C9orf3-213ENST00000471978 RTL8AQ9BWD3 113 aa18.61■□□□□ 0.57
C9orf3-213ENST00000471978 CHIAQ9BZP6 476 aa18.61■□□□□ 0.57
C9orf3-213ENST00000471978 KLHDC2Q9Y2U9 406 aa18.61■□□□□ 0.57
C9orf3-213ENST00000471978 MMP24Q9Y5R2 645 aa18.61■□□□□ 0.57
C9orf3-213ENST00000471978 POMT1Q9Y6A1 747 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms