RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 Q6ZNX1 250 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 DCDC5Q6ZRR9 648 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 KRT74Q7RTS7 529 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 CENPSQ8N2Z9 138 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 FAM169BQ8N8A8 192 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 WDR31Q8NA23 367 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 PNLDC1Q8NA58 520 aaKnown RBP8.12□□□□□ -1.11
VPS52-216ENST00000471309 KDF1Q8NAX2 398 aaPredicted RBP8.12□□□□□ -1.11
VPS52-216ENST00000471309 UBASH3BQ8TF42 649 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 C15orf40Q8WUR7 153 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 CPNE2Q96FN4 548 aaPredicted RBP8.12□□□□□ -1.11
VPS52-216ENST00000471309 ABHD1Q96SE0 405 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 REPIN1Q9BWE0 567 aaKnown RBP8.12□□□□□ -1.11
VPS52-216ENST00000471309 PIGMQ9H3S5 423 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 CNTD2Q9H8S5 307 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 NEK6Q9HC98 313 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 TBCCD1Q9NVR7 557 aa8.12□□□□□ -1.11
VPS52-216ENST00000471309 FAM208BQ5VWN6 2430 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 ACACAQ13085 2346 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 A0A0A6YYH2 397 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 A6NJ64 397 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 GSTZ1O43708 216 aaPredicted RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 CTAG2O75638 210 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 UBBP0CG47 229 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 PSMB1P20618 241 aaKnown RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 PRKACBP22694 351 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 IDH3GP51553 393 aaPredicted RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 EFNB2P52799 333 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 MRPS10P82664 201 aaKnown RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 QRFPP83859 136 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 PLA2G7Q13093 441 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 ASAH1Q13510 395 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 TSC22D1Q15714 1073 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 KISS1Q15726 138 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 TMEM69Q5SWH9 247 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 C3P1Q6ZMU1 363 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 RFPL4BQ6ZWI9 263 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 MRPL21Q7Z2W9 205 aaKnown RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 OR2W3Q7Z3T1 314 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 ZNF101Q8IZC7 436 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 PAQR4Q8N4S7 273 aaPredicted RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 POC5Q8NA72 575 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 CSNK2A3Q8NEV1 391 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 OR5L1Q8NGL2 311 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 SMIM4Q8WVI0 70 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 TRIM63Q969Q1 353 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 RFT1Q96AA3 541 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 NKX3-1Q99801 234 aaPredicted RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 KCNK15Q9H427 330 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 CDH20Q9HBT6 801 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 GHRLQ9UBU3 117 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 ZNF629Q9UEG4 869 aaPredicted RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 KCNN3Q9UGI6 736 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 TINAGQ9UJW2 476 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 RALYQ9UKM9 306 aaKnown RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 TBC1D24Q9ULP9 559 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 MRPS28Q9Y2Q9 187 aaKnown RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 URB1O60287 2271 aaKnown RBP8.11□□□□□ -1.11
VPS52-216ENST00000471309 CEP295Q9C0D2 2601 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 PTPRQQ9UMZ3 2332 aa8.11□□□□□ -1.11
VPS52-216ENST00000471309 ANKRD11Q6UB99 2663 aaPredicted RBP8.1□□□□□ -1.11
VPS52-216ENST00000471309 A0A1B0GVG6 124 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 A0A1W2PR80 420 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 GGT3PA6NGU5 568 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 TMEM14DPA8MWL7 114 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 A8MXE2 369 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 XRCC3O43542 346 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 SMPD2O60906 423 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 SCGNO76038 276 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 CST4P01036 141 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 NGFP01138 241 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 IGLV1-44P01699 117 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 CELA3BP08861 270 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 VSIG8P0DPA2 414 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 NAT2P11245 290 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 IL32P24001 234 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 CDK2P24941 298 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 ALDH3B1P43353 468 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 OR3A4PP47883 348 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 PTH2RP49190 550 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 TAS2R20P59543 309 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 PMPCAQ10713 525 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 TIMM23BQ5SRD1 257 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 AWAT2Q6E213 333 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 CRIP3Q6Q6R5 217 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 ZNF474Q6S9Z5 364 aaPredicted RBP8.1□□□□□ -1.11
VPS52-216ENST00000471309 LHFPL2Q6ZUX7 228 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 MRGPRGQ86SM5 289 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 BIVMQ86UB2 503 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 MYPOPQ86VE0 399 aaPredicted RBP8.1□□□□□ -1.11
VPS52-216ENST00000471309 ANGPTL5Q86XS5 388 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 FTMTQ8N4E7 242 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 DTX3Q8N9I9 347 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 PIGTQ969N2 578 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 C1orf147Q96MC9 270 aaPredicted RBP8.1□□□□□ -1.11
VPS52-216ENST00000471309 GPER1Q99527 375 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
VPS52-216ENST00000471309 THAP7Q9BT49 309 aaPredicted RBP8.1□□□□□ -1.11
VPS52-216ENST00000471309 DIABLOQ9NR28 239 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 GPR173Q9NS66 373 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms