RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PTBP1P26599 531 aaKnown RBP eCLIP7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 FGF9P31371 208 aaPredicted RBP7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 INPP1P49441 399 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 CAV3P56539 151 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 RPL15P61313 204 aaKnown RBP7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 MRPS15P82914 257 aaKnown RBP7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 IFITM2Q01629 132 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 C2orf68Q2NKX9 166 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 VAX1Q5SQQ9 334 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 WBP2NLQ6ICG8 309 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 CNIH2Q6PI25 160 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 METAP1DQ6UB28 335 aaPredicted RBP7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 KLBQ86Z14 1044 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 CPOQ8IVL8 374 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 RDH10Q8IZV5 341 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 SPICQ8N5J4 248 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 BBS1Q8NFJ9 593 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 OR2T33Q8NG76 320 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 MFSD8Q8NHS3 518 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 FANK1Q8TC84 345 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 STK35Q8TDR2 534 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 TMEM255BQ8WV15 326 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 TAF15Q92804 592 aaKnown RBP eCLIP7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 SLC25A36Q96CQ1 311 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 ZG16BQ96DA0 208 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 ATF6BQ99941 703 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 JAM3Q9BX67 310 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 MMP26Q9NRE1 261 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 SLC7A7Q9UM01 511 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 CHST2Q9Y4C5 530 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 RNF114Q9Y508 228 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 N6AMT1Q9Y5N5 214 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 INSIG2Q9Y5U4 225 aa7.52□□□□□ -1.21
SYNGAP1-205ENST00000470232 IGLV3-9A0A075B6K5 115 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 C5orf63A6NC05 138 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 FAM172BPA6NC97 362 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 CENPXA8MT69 81 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 SRRM5B3KS81 715 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 HOXA3O43365 443 aaPredicted RBP7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 RNF13O43567 381 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 OR2T1O43869 369 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 HPGDSO60760 199 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 SLC2A10O95528 541 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 LALBAP00709 142 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 IGHA1P01876 353 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 THY1P04216 161 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 SERPINA5P05154 406 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 DBIP07108 87 aaKnown RBP7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 SBK2P0C263 348 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 IFI30P13284 250 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 ZNF81P51508 661 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 BPIFB3P59826 476 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 ACSM1Q08AH1 577 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 IL18Q14116 193 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 SLC35F1Q5T1Q4 408 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 CD200R1LQ6Q8B3 271 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 ZNF322Q6U7Q0 402 aaPredicted RBP7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 FIP1L1Q6UN15 594 aaKnown RBP7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 BTNL3Q6UXE8 466 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 LRRN1Q6UXK5 716 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 MEPCEQ7L2J0 689 aaKnown RBP7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 ZNF627Q7L945 461 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 KDM8Q8N371 416 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 CADM2Q8N3J6 435 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 OR51G2Q8NGK0 314 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 OR1J2Q8NGS2 313 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 OR6F1Q8NGZ6 308 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 SLC7A6Q92536 515 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 ZNF837Q96EG3 531 aaPredicted RBP7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 ST6GAL2Q96JF0 529 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 ZNF75AQ96N20 296 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 BCL2L14Q9BZR8 327 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 OR52D1Q9H346 318 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 C1orf198Q9H425 327 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 FN3KQ9H479 309 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 RNF121Q9H920 327 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 MARCH7Q9H992 704 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 CDH20Q9HBT6 801 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 NOX4Q9NPH5 578 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 IL20Q9NYY1 176 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 C1RLQ9NZP8 487 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 OR5V1Q9UGF6 321 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 IL20RAQ9UHF4 553 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 NUFIP1Q9UHK0 495 aaKnown RBP7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 TMEM5Q9Y2B1 443 aa7.51□□□□□ -1.21
SYNGAP1-205ENST00000470232 PLSCR5A0PG75 271 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 DAPL1A0PJW8 107 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 C12orf71A8MTZ7 269 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 TRAPPC2LH3BP13 241 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 PNMTP11086 282 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 SLC2A2P11168 524 aaPredicted RBP7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 CELP19835 753 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 PAICSP22234 425 aaKnown RBP7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 CFL1P23528 166 aaKnown RBP7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 HLA-DMAP28067 261 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 MTNR1BP49286 362 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 LOXL3P58215 753 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 RPS7P62081 194 aaKnown RBP7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 BDH1Q02338 343 aa7.5□□□□□ -1.21
SYNGAP1-205ENST00000470232 PAX8Q06710 450 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms