RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 SVOPQ8N4V2 548 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 ZNF676Q8N7Q3 588 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 GATAD2BQ8WXI9 593 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 PP6455Q8WZ26 134 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 PERPQ96FX8 193 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 LYZL4Q96KX0 146 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 SORCS2Q96PQ0 1159 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 RHNO1Q9BSD3 238 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 SAP30LQ9HAJ7 183 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 NEK6Q9HC98 313 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 ERVK-18Q9QC07 812 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 LRCH1Q9Y2L9 728 aa10.74□□□□□ -0.69
SPTLC1-204ENST00000469778 ARID1AO14497 2285 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 TRIM64A6NGJ6 449 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 P2RY10O00398 339 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 PLPP2O43688 288 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 GATBO75879 557 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 ZFPL1O95159 310 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 FSTL3O95633 263 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 CA6P23280 308 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 GIFP27352 417 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 CD200P41217 278 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 PDLIM4P50479 330 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 NANOS3P60323 173 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 CDK5R1Q15078 307 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 HFEQ30201 348 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 KCTD21Q4G0X4 260 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 YIF1BQ5BJH7 314 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 TMEM255AQ5JRV8 349 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 CLVS2Q5SYC1 327 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 TMEM42Q69YG0 159 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 CLEC2AQ6UVW9 174 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 SPNS3Q6ZMD2 512 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 DNM1P46Q6ZS02 220 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 OR5AS1Q8N127 324 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 MS4A15Q8N5U1 240 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 BHLHE23Q8NDY6 225 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 OR5A2Q8NGI9 324 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 OR14K1Q8NGZ2 314 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 OR8S1Q8NH09 359 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 RPS4Y2Q8TD47 263 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 HPS1Q92902 700 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 PPP1R14AQ96A00 147 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 SMIM19Q96E16 107 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 FAM71F1Q96KD3 344 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 MICU1Q9BPX6 476 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 PAPOLGQ9BWT3 736 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 CCDC90BQ9GZT6 254 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 CHODLQ9H9P2 273 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 PLEKHA1Q9HB21 404 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 PAK1IP1Q9NWT1 392 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 PIGLQ9Y2B2 252 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 RHBDD3Q9Y3P4 386 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 USF3Q68DE3 2245 aa10.73□□□□□ -0.69
SPTLC1-204ENST00000469778 IGHV1-69-2A0A0G2JMI3 117 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 LOC107986453A0A1B0GWG9 222 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 OR5B21A6NL26 309 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 TMEM210A6NLX4 147 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 LRRC30A6NM36 301 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 E9PI62 339 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 SSX4O60224 188 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 ALX3O95076 343 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 CD2P06729 351 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 CPT2P23786 658 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 ACKR3P25106 362 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 MAGEB1P43366 347 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 KIR3DL2P43630 455 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 CCL8P80075 99 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 TNK1Q13470 666 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 TBCEQ15813 527 aaPredicted RBP10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 TSTQ16762 297 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 ZNF181Q2M3W8 571 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 CEACAM21Q3KPI0 293 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 FAM76BQ5HYJ3 339 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 Q5PR19 223 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 DMKNQ6E0U4 476 aaPredicted RBP10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 PEG10Q86TG7 708 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 ZDHHC23Q8IYP9 409 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 ZCCHC24Q8N2G6 241 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 GPR148Q8TDV2 347 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 FCGR1BQ92637 280 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 GHSRQ92847 366 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 ADAT1Q9BUB4 502 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 RTL8AQ9BWD3 113 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 TPK1Q9H3S4 243 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 ZNF275Q9NSD4 429 aaPredicted RBP10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 ZNF281Q9Y2X9 895 aa10.72□□□□□ -0.69
SPTLC1-204ENST00000469778 MLNRO43193 412 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 TNFAIP8O95379 198 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 NRASP01111 189 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 HPXP02790 462 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 SLC25A16P16260 332 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 ANOS1P23352 680 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 PSMA1P25786 263 aaKnown RBP10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 CHN2P52757 468 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 PRDX4Q13162 271 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 TPBGQ13641 420 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 TRAM1Q15629 374 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 CLEC12BQ2HXU8 276 aa10.71□□□□□ -0.69
SPTLC1-204ENST00000469778 UTS2BQ765I0 119 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms