RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 GJC3Q8NFK1 279 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 SUN5Q8TC36 379 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 NUDT16L1Q9BRJ7 211 aaKnown RBP12.88□□□□□ -0.35
CBWD3-205ENST00000469687 FOXD3Q9UJU5 478 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-205ENST00000469687 COL27A1Q8IZC6 1860 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-205ENST00000469687 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 STMND1H3BQB6 276 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 MFNGO00587 321 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 EFSO43281 561 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 LAMTOR5O43504 91 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 SCGNO76038 276 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 CHRM2P08172 466 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 CTSSP25774 331 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 TRA2AQ13595 282 aaKnown RBP eCLIP12.88□□□□□ -0.35
CBWD3-205ENST00000469687 SNAI3Q3KNW1 292 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 FOXL2NBQ6ZUU3 175 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 KCTD9Q7L273 389 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 NAXDQ8IW45 347 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 OR6K3Q8NGY3 331 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 MITD1Q8WV92 249 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 PPP1R1CQ8WVI7 109 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 IER2Q9BTL4 223 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 MFSD2BA6NFX1 497 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 C19orf67A6NJJ6 358 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 KCNAB3O43448 404 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 EIF1BO60739 113 aaKnown RBP12.87□□□□□ -0.35
CBWD3-205ENST00000469687 OTX2P32243 289 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 ZNF133P52736 654 aaPredicted RBP12.87□□□□□ -0.35
CBWD3-205ENST00000469687 B3GALT5-AS1P59052 145 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 RELL2Q8NC24 303 aaPredicted RBP12.87□□□□□ -0.35
CBWD3-205ENST00000469687 ASB13Q8WXK3 278 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 MAFIPQ8WZ33 124 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 PIGTQ969N2 578 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 FBXW5Q969U6 566 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 ULBP2Q9BZM5 246 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 PLEK2Q9NYT0 353 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 KCNMB2Q9Y691 235 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 M0R135 149 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 DHRS3O75911 302 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 SNAPC5O75971 98 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 CER1O95813 267 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 F10P00742 488 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 GSTP1P09211 210 aaKnown RBP12.87□□□□□ -0.35
CBWD3-205ENST00000469687 RFPL3SP0C7P2 107 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 SERPINA2P20848 420 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 PTGFRP43088 359 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 NPY4RP50391 375 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 RAC1P63000 192 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 CSNK2A1P68400 391 aaPredicted RBP12.87□□□□□ -0.35
CBWD3-205ENST00000469687 SRSF4Q08170 494 aaKnown RBP12.87□□□□□ -0.35
CBWD3-205ENST00000469687 ZMYND11Q15326 602 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 HOGA1Q86XE5 327 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 ZNF799Q96GE5 643 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 LINC00052Q96N35 136 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 NAA11Q9BSU3 229 aaPredicted RBP12.87□□□□□ -0.35
CBWD3-205ENST00000469687 PRR13Q9NZ81 148 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 ANAPC10Q9UM13 185 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 PIGLQ9Y2B2 252 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 TECTAO75443 2155 aa12.87□□□□□ -0.35
CBWD3-205ENST00000469687 CBR3O75828 277 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 VAMP5O95183 116 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 PRF1P14222 555 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 PI3P19957 117 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 CALCRP30988 508 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 OTX1P32242 354 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-205ENST00000469687 DUSP3P51452 185 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-205ENST00000469687 HIST1H3AP68431 136 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 ECH1Q13011 328 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 BAMBIQ13145 260 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 HIST2H3PS2Q5TEC6 136 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 TCEAL6Q6IPX3 200 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 C11orf87Q6NUJ2 197 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 HIST2H3AQ71DI3 136 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 PPP1R32Q7Z5V6 425 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 OR51T1Q8NGJ9 327 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 OR2AE1Q8NHA4 323 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 C17orf50Q8WW18 174 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 TCEAL3Q969E4 200 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 PHB2Q99623 299 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 OR10A2Q9H208 303 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 V9GYS6 101 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 A0A0U1RQV5 110 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 RNF222A6NCQ9 220 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 EEF1E1-BLOC1S5C9J1V9 151 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 PATE4P0C8F1 98 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 NR2C1P13056 603 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 NAT1P18440 290 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 STARP49675 285 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 RPS27AP62979 156 aaKnown RBP12.86□□□□□ -0.35
CBWD3-205ENST00000469687 HGFACQ04756 655 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 FAM74A1Q5RGS3 127 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 JMJD6Q6NYC1 403 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-205ENST00000469687 LPCAT3Q6P1A2 487 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.86□□□□□ -0.35
CBWD3-205ENST00000469687 SLC51BQ86UW2 128 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
CBWD3-205ENST00000469687 OR56B1Q8NGI3 324 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 OR1S1Q8NH92 325 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 PIGQQ9BRB3 760 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 ST6GALNAC5Q9BVH7 336 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms