RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 VPS25Q9BRG1 176 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PYGO2Q9BRQ0 406 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 GINS3Q9BRX5 216 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ATG101Q9BSB4 218 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 ALKBH7Q9BT30 221 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 RNF126Q9BV68 326 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 EBPLQ9BY08 206 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 MRPL13Q9BYD1 178 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 TBL1XR1Q9BZK7 514 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 OR2J1Q9GZK6 312 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 OR11A1Q9GZK7 315 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PCBD2Q9H0N5 130 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 RBKSQ9H477 322 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CDH20Q9HBT6 801 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SGK2Q9HBY8 427 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 HINT3Q9NQE9 182 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 AURKAIP1Q9NWT8 199 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SOHLH2Q9NX45 425 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 P4HTMQ9NXG6 502 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 FKBP11Q9NYL4 201 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 CLEC1BQ9P126 229 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 NAGKQ9UJ70 344 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 RPH3ALQ9UNE2 315 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 NTNG1Q9Y2I2 539 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 AK6Q9Y3D8 172 aaKnown RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 HS3ST4Q9Y661 456 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 SIRT4Q9Y6E7 314 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PRSS21Q9Y6M0 314 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 PDE4DIPQ5VU43 2346 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 EVPLQ92817 2033 aa4.33□□□□□ -1.72
SF3B1-207ENST00000468925 MYO16Q9Y6X6 1858 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 TRBV5-5A0A0J9YX44 114 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 FAM230AA0A1W2PPH8 454 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 RBFOX3A6NFN3 312 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM212A6NML5 194 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 DHRS7CA6NNS2 312 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 A8MVM7 634 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 HHLA1C9JL84 531 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 E5RGE8 158 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 PROB1E7EW31 1015 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 H0Y8G0 127 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 H3BQ15 152 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 J3QR06 171 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SLC17A2O00624 439 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 YY2O15391 372 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 B4GALT3O60512 393 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 GPR32O75388 356 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 PPP1R3DO95685 299 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SLC16A8O95907 504 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 MBPP02686 304 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CD3DP04234 171 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ELFN1P0C7U0 828 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SMIM10L2AP0DMW4 78 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SMIM10L2BP0DMW5 78 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 TXNP10599 105 aaKnown RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 TDGF1P13385 188 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 IRF2P14316 349 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 EPORP19235 508 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 LMO2P25791 158 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CHRNB4P30926 498 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SLC6A6P31641 620 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ACVR1BP36896 505 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 NAA10P41227 235 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 GDF5P43026 501 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CSNK1A1P48729 337 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF41P51814 821 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SLURP1P55000 103 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SUMO3P55854 103 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 BIDP55957 195 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 LILRA4P59901 499 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 MAXP61244 160 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 RAE1P78406 368 aaKnown RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 HLA-DRB3P79483 266 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 LCN2P80188 198 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF85Q03923 595 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 PLP2Q04941 152 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF616Q08AN1 781 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 NOGQ13253 232 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF266Q14584 549 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 INSL4Q14641 139 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 RTP5Q14D33 572 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ARL6IP1Q15041 203 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 NSDHLQ15738 373 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 MIDNQ504T8 468 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 BEX5Q5H9J7 111 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 LRRC73Q5JTD7 316 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CST9Q5W186 159 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 STAC2Q6ZMT1 411 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF705AQ6ZN79 300 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 MED25Q71SY5 747 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 CHST9Q7L1S5 443 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 BHLHA9Q7RTU4 235 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SCD5Q86SK9 330 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF429Q86V71 674 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 THOC6Q86W42 341 aaKnown RBP4.32□□□□□ -1.72
SF3B1-207ENST00000468925 SERPINA9Q86WD7 417 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 NRMQ8IXM6 262 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 PIANPQ8IYJ0 282 aa4.32□□□□□ -1.72
SF3B1-207ENST00000468925 ZNF101Q8IZC7 436 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms