RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 CDS1Q92903 461 aa0.26□□□□□ -2.37
SSB-208ENST00000468600 SLC29A1Q99808 456 aa0.26□□□□□ -2.37
SSB-208ENST00000468600 ROPN1BQ9BZX4 212 aaPredicted RBP0.26□□□□□ -2.37
SSB-208ENST00000468600 CA10Q9NS85 328 aa0.26□□□□□ -2.37
SSB-208ENST00000468600 HPF1Q9NWY4 346 aa0.26□□□□□ -2.37
SSB-208ENST00000468600 ZNF443Q9Y2A4 671 aaPredicted RBP0.26□□□□□ -2.37
SSB-208ENST00000468600 MROH5Q6ZUA9 1318 aa0.26□□□□□ -2.37
SSB-208ENST00000468600 NOL3O60936 208 aaKnown RBP0.25□□□□□ -2.37
SSB-208ENST00000468600 CDH16O75309 829 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 MYL9P24844 172 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 TPMTP51580 245 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 DDX39BQ13838 428 aaKnown RBP0.25□□□□□ -2.37
SSB-208ENST00000468600 KLHL40Q2TBA0 621 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 ZNF829Q3KNS6 432 aaPredicted RBP0.25□□□□□ -2.37
SSB-208ENST00000468600 CDH26Q8IXH8 852 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 OR4K13Q8NH42 304 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 NUBPLQ8TB37 319 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 GPR119Q8TDV5 335 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 ITLN2Q8WWU7 325 aaPredicted RBP0.25□□□□□ -2.37
SSB-208ENST00000468600 RSPH1Q8WYR4 309 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 RAD51AP1Q96B01 352 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 ZNF625Q96I27 306 aaPredicted RBP0.25□□□□□ -2.37
SSB-208ENST00000468600 TRIB3Q96RU7 358 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 ERP44Q9BS26 406 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 EMC6Q9BV81 110 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 RGS18Q9NS28 235 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 CCDC59Q9P031 241 aaKnown RBP0.25□□□□□ -2.37
SSB-208ENST00000468600 STARD10Q9Y365 291 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 TRAPPC1Q9Y5R8 145 aa0.25□□□□□ -2.37
SSB-208ENST00000468600 SIGLEC1Q9BZZ2 1709 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 LOC102724200A0A096LPH7 203 aaPredicted RBP0.24□□□□□ -2.37
SSB-208ENST00000468600 A0A0A6YYD5 115 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 HPRT1P00492 218 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 TRBV12-3P01733 135 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 CGB7P0DN87 165 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 MX1P20591 662 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 PFN2P35080 140 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 ACLYP53396 1101 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 TPTE2P1Q5T6R2 138 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 METAP1DQ6UB28 335 aaPredicted RBP0.24□□□□□ -2.37
SSB-208ENST00000468600 ZNF767PQ75MW2 155 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 IQCKQ8N0W5 287 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 OR8K1Q8NGG5 319 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 TEAD3Q99594 435 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 ILKAPQ9H0C8 392 aaPredicted RBP0.24□□□□□ -2.37
SSB-208ENST00000468600 CXCL16Q9H2A7 254 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 ACOT9Q9Y305 439 aa0.24□□□□□ -2.37
SSB-208ENST00000468600 TMEM72A0PK05 275 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 IL3RAP26951 378 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 TNNT2P45379 298 aaPredicted RBP0.23□□□□□ -2.37
SSB-208ENST00000468600 RGS6P49758 472 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 AIF1P55008 147 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 KDSRQ06136 332 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 DHRS2Q13268 280 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 PSMD5Q16401 504 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 C12orf54Q6X4T0 127 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 ZNF563Q8TA94 476 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 TUBGCP3Q96CW5 907 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 HSPB9Q9BQS6 159 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 SFXN3Q9BWM7 321 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 VCX2Q9H322 139 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 KIR3DX1Q9H7L2 352 aa0.23□□□□□ -2.37
SSB-208ENST00000468600 FAM240BA0A1B0GVZ2 78 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 CST1P01037 141 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 PGA5P0DJD9 388 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 PBLDP30039 288 aaPredicted RBP0.22□□□□□ -2.37
SSB-208ENST00000468600 MAGEA6P43360 314 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 ATP5G2Q06055 141 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 CHIT1Q13231 466 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 GCSAMLQ5JQS6 135 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 PPM1LQ5SGD2 360 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 TMEM144Q7Z5S9 345 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 CMC1Q7Z7K0 106 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 BHLHE23Q8NDY6 225 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 BPIFB6Q8NFQ5 453 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 CACNG8Q8WXS5 425 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 YIPF6Q96EC8 236 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 NEUROG2Q9H2A3 272 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 RDH14Q9HBH5 336 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 RBFOX1Q9NWB1 397 aaKnown RBP0.22□□□□□ -2.37
SSB-208ENST00000468600 MRPL16Q9NX20 251 aaKnown RBP0.22□□□□□ -2.37
SSB-208ENST00000468600 SLC39A1Q9NY26 324 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 ISY1Q9ULR0 285 aaKnown RBP0.22□□□□□ -2.37
SSB-208ENST00000468600 CLEC4AQ9UMR7 237 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 ICOSQ9Y6W8 199 aa0.22□□□□□ -2.37
SSB-208ENST00000468600 COL4A2P08572 1712 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 AIM2O14862 343 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 PSPHP1O15172 72 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 GMFGO60234 142 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 RAB36O95755 333 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 PGA4P0DJD7 388 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 PGA3P0DJD8 388 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 USF1P22415 310 aaPredicted RBP0.21□□□□□ -2.38
SSB-208ENST00000468600 PRSS3P35030 304 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 CFHR2P36980 270 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 MYCNOSP40205 109 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 SLC1A1P43005 524 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 EIF3EP60228 445 aaKnown RBP0.21□□□□□ -2.38
SSB-208ENST00000468600 ST3GAL4Q11206 333 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 C6orf99Q4VX62 202 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms