RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 RIPK1Q13546 671 aa16.87■□□□□ 0.29
NPHP4-206ENST00000468253 TMEM155Q4W5P6 130 aa16.87■□□□□ 0.29
NPHP4-206ENST00000468253 BCL2L15Q5TBC7 163 aa16.87■□□□□ 0.29
NPHP4-206ENST00000468253 FAM220AQ7Z4H9 259 aa16.87■□□□□ 0.29
NPHP4-206ENST00000468253 MOGAT3Q86VF5 341 aa16.87■□□□□ 0.29
NPHP4-206ENST00000468253 LINC01356Q8N9X3 169 aa16.87■□□□□ 0.29
NPHP4-206ENST00000468253 SEMA6DQ8NFY4 1073 aa16.87■□□□□ 0.29
NPHP4-206ENST00000468253 MSI2Q96DH6 328 aaKnown RBP16.87■□□□□ 0.29
NPHP4-206ENST00000468253 JAM3Q9BX67 310 aa16.87■□□□□ 0.29
NPHP4-206ENST00000468253 FN3KRPQ9HA64 309 aa16.87■□□□□ 0.29
NPHP4-206ENST00000468253 FGF20Q9NP95 211 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-206ENST00000468253 ZNF816-ZNF321PA0A0X1KG74 233 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 A0A1B0GTI1 187 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 WNT9BO14905 357 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 DHRS3O75911 302 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 RPP14O95059 124 aaKnown RBP16.86■□□□□ 0.29
NPHP4-206ENST00000468253 CLIC3O95833 236 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 IGHV2-70P01814 119 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 DCKP27707 260 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 ACTA2P62736 377 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 ACTG2P63267 376 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 FAM76BQ5HYJ3 339 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 SYS1Q8N2H4 156 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 OR11L1Q8NGX0 322 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 OR8S1Q8NH09 359 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 MICU1Q9BPX6 476 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 ZNF649Q9BS31 505 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 TMEM160Q9NX00 188 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 GNG8Q9UK08 70 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 MYRFQ9Y2G1 1151 aa16.86■□□□□ 0.29
NPHP4-206ENST00000468253 ANXA2P2A6NMY6 339 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 A8MV72 311 aaPredicted RBP16.85■□□□□ 0.29
NPHP4-206ENST00000468253 B4DSR2 109 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 IRF2P14316 349 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 CCL1P22362 96 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 IL2RGP31785 369 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 CFHR2P36980 270 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 CCR9P51686 369 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 CDH15P55291 814 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 BTG1P62324 171 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 MRPL28Q13084 256 aaKnown RBP16.85■□□□□ 0.29
NPHP4-206ENST00000468253 C6orf52Q5T4I8 152 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 AVPI1Q5T686 147 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 Q71RC1 249 aaPredicted RBP16.85■□□□□ 0.29
NPHP4-206ENST00000468253 DOK3Q7L591 496 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 C8orf59Q8N0T1 100 aaPredicted RBP16.85■□□□□ 0.29
NPHP4-206ENST00000468253 OR52I1Q8NGK6 324 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 HAVCR2Q8TDQ0 301 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 FBLIM1Q8WUP2 373 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 NRG4Q8WWG1 115 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 OR5P3Q8WZ94 311 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 RNF166Q96A37 237 aaPredicted RBP16.85■□□□□ 0.29
NPHP4-206ENST00000468253 RAB39BQ96DA2 213 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 ITPKCQ96DU7 683 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 HIST1H2AAQ96QV6 131 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 SOX7Q9BT81 388 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 PAPOLGQ9BWT3 736 aaKnown RBP16.85■□□□□ 0.29
NPHP4-206ENST00000468253 VCX3BQ9H321 246 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 DCAF16Q9NXF7 216 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 RNF7Q9UBF6 113 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 SLC22A13Q9Y226 551 aa16.85■□□□□ 0.29
NPHP4-206ENST00000468253 CR1P17927 2039 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 RPSAP08865 295 aaKnown RBP16.84■□□□□ 0.29
NPHP4-206ENST00000468253 MDH2P40926 338 aaKnown RBP16.84■□□□□ 0.29
NPHP4-206ENST00000468253 OR12D2P58182 307 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 PRDX4Q13162 271 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 MPPED2Q15777 294 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 SMN1Q16637 294 aaKnown RBP16.84■□□□□ 0.29
NPHP4-206ENST00000468253 TP53I3Q53FA7 332 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 THAP5Q7Z6K1 395 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 LHFPL3Q86UP9 236 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 MUC20Q8N307 709 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-206ENST00000468253 SPICQ8N5J4 248 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 OR14K1Q8NGZ2 314 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 OR2G2Q8NGZ5 317 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 ZNF420Q8TAQ5 688 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-206ENST00000468253 PIGCQ92535 297 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 FAM71F1Q96KD3 344 aaPredicted RBP16.84■□□□□ 0.29
NPHP4-206ENST00000468253 ZNF665Q9H7R5 613 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 TMEM165Q9HC07 324 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 YAE1D1Q9NRH1 226 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 PLCXD1Q9NUJ7 323 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 ERVK13-1Q9NX77 482 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 ENPP5Q9UJA9 477 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 GTF2A1LQ9UNN4 478 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 V9GYS6 101 aa16.84■□□□□ 0.29
NPHP4-206ENST00000468253 SONP18583 2426 aaKnown RBP16.84■□□□□ 0.29
NPHP4-206ENST00000468253 NF1P21359 2839 aa16.83■□□□□ 0.29
NPHP4-206ENST00000468253 TMEM210A6NLX4 147 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 ZNF850A8MQ14 1090 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 TGFAP01135 160 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 IGHV2-5P01817 119 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 ZNF12P17014 697 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 ZMYND11Q15326 602 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 TMEM42Q69YG0 159 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 FAM166AQ6J272 317 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 COMMD2Q86X83 199 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 C11orf53Q8IXP5 236 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 PRSS35Q8N3Z0 413 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 OR1M1Q8NGA1 313 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms