RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 C3orf56Q8N813 242 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 BOLLQ8N9W6 283 aaKnown RBP11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 SPERTQ8NA61 448 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 OR8B12Q8NGG6 310 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 OR11L1Q8NGX0 322 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 OR8S1Q8NH09 359 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 PPP1R14AQ96A00 147 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 HRASLS5Q96KN8 279 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 MNTQ99583 582 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 RGCCQ9H4X1 137 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 ZMAT3Q9HA38 289 aaKnown RBP11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 CLN6Q9NWW5 311 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 GTF2A1LQ9UNN4 478 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 RHBDD3Q9Y3P4 386 aa11.79□□□□□ -0.52
CCHCR1-211ENST00000467553 PHYHO14832 338 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 FAM20BO75063 409 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 FSHBP01225 129 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 GNALP38405 381 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 GATA4P43694 442 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 LCN2P80188 198 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 ROM1Q03395 351 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 MZT1Q08AG7 82 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 COMMD2Q86X83 199 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 KLBQ86Z14 1044 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 MUC20Q8N307 709 aaPredicted RBP11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 CSNK2A3Q8NEV1 391 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 TRUB1Q8WWH5 349 aaKnown RBP11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 RFKQ969G6 155 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 ERGIC1Q969X5 290 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 LYZL4Q96KX0 146 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 PPP1R3EQ9H7J1 279 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 FN3KRPQ9HA64 309 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 PATZ1Q9HBE1 687 aaKnown RBP11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 TMEM165Q9HC07 324 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 C14orf119Q9NWQ9 140 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 PPIAL4AQ9Y536 164 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 GMPPBQ9Y5P6 360 aa11.78□□□□□ -0.52
CCHCR1-211ENST00000467553 ACOD1A6NK06 481 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 A6NLC8 198 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 ANKRD65E5RJM6 399 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 ENTPD6O75354 484 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 FSTL3O95633 263 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 DCTDP32321 178 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 POU4F2Q12837 409 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 ZNF181Q2M3W8 571 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 ZNF829Q3KNS6 432 aaPredicted RBP11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 RBMS3Q6XE24 437 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 PLEKHG7Q6ZR37 379 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 ZNF826PQ6ZT77 177 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 YIPF7Q8N8F6 280 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 OR10H4Q8NGA5 316 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 PIGCQ92535 297 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 MBOAT4Q96T53 435 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 PAPOLGQ9BWT3 736 aaKnown RBP11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 PBOV1Q9GZY1 135 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 C1orf123Q9NWV4 160 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 FAM206AQ9NX38 181 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 RNF7Q9UBF6 113 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 AASSQ9UDR5 926 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 OPN4Q9UHM6 478 aa11.77□□□□□ -0.53
CCHCR1-211ENST00000467553 hCG_1807616A0A1W2PRN6 198 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 ZNF850A8MQ14 1090 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 A8MXK9 166 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 LOC110117498-PIK3R3F6TDL0 507 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 RPP14O95059 124 aaKnown RBP11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 OR2T7P0C7T2 308 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 PPIAL4GP0DN37 164 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 ACKR3P25106 362 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 MAP2K3P46734 347 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 HOXA4Q00056 320 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 EGR3Q06889 387 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 TMED1Q13445 227 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 OR8B8Q15620 311 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 SNCBQ16143 134 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 TUSC1Q2TAM9 212 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 SFRP4Q6FHJ7 346 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 SSX6Q7RTT6 188 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 GALNT4Q8N4A0 578 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 FTMTQ8N4E7 242 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 OR2T27Q8NH04 317 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 OR51E1Q8TCB6 317 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 Q8TCH9 128 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 FAM71F1Q96KD3 344 aaPredicted RBP11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 SLC6A7Q99884 636 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 TMEM246Q9BRR3 403 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 MRM2Q9UI43 246 aaKnown RBP11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 ZNF391Q9UJN7 358 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 NUP50Q9UKX7 468 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 MPC1Q9Y5U8 109 aa11.76□□□□□ -0.53
CCHCR1-211ENST00000467553 A0A0U1RQV5 110 aa11.75□□□□□ -0.53
CCHCR1-211ENST00000467553 LOC100130705A0A1B0GUX0 176 aa11.75□□□□□ -0.53
CCHCR1-211ENST00000467553 A0A1W2PQL4 384 aaPredicted RBP11.75□□□□□ -0.53
CCHCR1-211ENST00000467553 ANXA2P2A6NMY6 339 aa11.75□□□□□ -0.53
CCHCR1-211ENST00000467553 CEACAM18A8MTB9 384 aa11.75□□□□□ -0.53
CCHCR1-211ENST00000467553 SPRY1O43609 319 aaPredicted RBP11.75□□□□□ -0.53
CCHCR1-211ENST00000467553 KRT8P05787 483 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms