RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CEACAM19Q7Z692 300 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 OR52H1Q8NGJ2 320 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 APOBEC3DQ96AK3 386 aaPredicted RBP12.73□□□□□ -0.37
DDX56-208ENST00000467318 PIK3IP1Q96FE7 263 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 C1QTNF5Q9BXJ0 243 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 TUBG2Q9NRH3 451 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 RNF115Q9Y4L5 304 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 CADP27708 2225 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 OGG1O15527 345 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 GATBO75879 557 aaKnown RBP12.73□□□□□ -0.37
DDX56-208ENST00000467318 ARL6IP5O75915 188 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 ZNF121P58317 390 aaPredicted RBP12.73□□□□□ -0.37
DDX56-208ENST00000467318 CCDC58Q4VC31 144 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 DMKNQ6E0U4 476 aaPredicted RBP12.73□□□□□ -0.37
DDX56-208ENST00000467318 NUP37Q8NFH4 326 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 OR5L1Q8NGL2 311 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 CAPSLQ8WWF8 208 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 ST6GAL2Q96JF0 529 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 CMTM3Q96MX0 182 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 TMEM204Q9BSN7 226 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 MMP28Q9H239 520 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 MOB1AQ9H8S9 216 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 ACOXLQ9NUZ1 547 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 EXTL2Q9UBQ6 330 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 R4GMQ9 66 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 SMIM30A4D0T7 59 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 FAM221AA4D161 298 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 ATP6V1G2-DDX39BF2Z307 99 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 ORC5O43913 435 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 LCATP04180 440 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 ANXA2P07355 339 aaKnown RBP12.72□□□□□ -0.37
DDX56-208ENST00000467318 LOXP28300 417 aaPredicted RBP12.72□□□□□ -0.37
DDX56-208ENST00000467318 WNT5AP41221 380 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 BTG1P62324 171 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 PITPNAQ00169 270 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 HGFACQ04756 655 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 HIST2H2BCQ6DN03 193 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 PYHIN1Q6K0P9 492 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 RPL22L1Q6P5R6 122 aaKnown RBP12.72□□□□□ -0.37
DDX56-208ENST00000467318 PRSS45Q7RTY3 260 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 NAA40Q86UY6 237 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 ZNF101Q8IZC7 436 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 PELI1Q96FA3 418 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 SIRT4Q9Y6E7 314 aaPredicted RBP12.72□□□□□ -0.37
DDX56-208ENST00000467318 PKDREJQ9NTG1 2253 aa12.72□□□□□ -0.37
DDX56-208ENST00000467318 SHISA3A0PJX4 238 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 GPRIN2O60269 458 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 SMPD2O60906 423 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 SRSF10O75494 262 aaKnown RBP12.71□□□□□ -0.37
DDX56-208ENST00000467318 SC5DO75845 299 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 NCR1O76036 304 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 RPP14O95059 124 aaKnown RBP12.71□□□□□ -0.37
DDX56-208ENST00000467318 ELK1P19419 428 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 GLRXP35754 106 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 NR4A2P43354 598 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 RPS23P62266 143 aaKnown RBP12.71□□□□□ -0.37
DDX56-208ENST00000467318 NKX6-1P78426 367 aaPredicted RBP12.71□□□□□ -0.37
DDX56-208ENST00000467318 SLC3A1Q07837 685 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 SPOCK1Q08629 439 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 ACSM3Q53FZ2 586 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 ZNF57Q68EA5 555 aaPredicted RBP12.71□□□□□ -0.37
DDX56-208ENST00000467318 ADAM5Q6NVV9 412 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 FDX2Q6P4F2 183 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 TRAF4Q9BUZ4 470 aaPredicted RBP12.71□□□□□ -0.37
DDX56-208ENST00000467318 FAM206AQ9NX38 181 aa12.71□□□□□ -0.37
DDX56-208ENST00000467318 VSTM5A8MXK1 200 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 SHISA9B4DS77 424 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 PNPP00491 289 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 NGFP01138 241 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 FAM157BP0CG42 384 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 RAB3BP20337 219 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 PITPNBP48739 271 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 MRPS15P82914 257 aaKnown RBP12.7□□□□□ -0.38
DDX56-208ENST00000467318 SFXN4Q6P4A7 337 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 RFT1Q96AA3 541 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 CREB3L1Q96BA8 519 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 MARVELD1Q9BSK0 173 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 OR10A2Q9H208 303 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 ZCCHC4Q9H5U6 513 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 BRD7Q9NPI1 651 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 CA10Q9NS85 328 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 NUFIP1Q9UHK0 495 aaKnown RBP12.7□□□□□ -0.38
DDX56-208ENST00000467318 ZNF391Q9UJN7 358 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 XRCC2O43543 280 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 GSTT2P0CG29 244 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 GSTT2BP0CG30 244 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 SLC2A1P11166 492 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 CCR9P51686 369 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 PPP1CBP62140 327 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 MALLQ13021 153 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 SNTB2Q13425 540 aaKnown RBP12.7□□□□□ -0.38
DDX56-208ENST00000467318 P2RY14Q15391 338 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 ZNF704Q6ZNC4 412 aaPredicted RBP12.7□□□□□ -0.38
DDX56-208ENST00000467318 FAM57BQ71RH2 274 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 NOXA1Q86UR1 476 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 TCTE3Q8IZS6 198 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 OR1J1Q8NGS3 322 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 OR2G2Q8NGZ5 317 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms